Information for 4-ATCTCTGGCATCT (Motif 3)

C G T A A C G T A G T C A C G T T A G C C A G T A C T G C T A G A T G C C G T A A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C G T A T C G A G T C G T A C G C T A A C T G C G T A A C T G C G T A A C G T
p-value:1e-19
log p-value:-4.550e+01
Information Content per bp:1.905
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.0 +/- 17.0bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LEF1/MA0768.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATCTCTGGCATCT--
AACCCTTTGATCTTT
 C G T A A C G T A G T C A C G T T A G C C A G T A C T G C T A G A T G C C G T A A C G T A G T C A C G T A C G T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATCTCTGGCATCT-
CAATCACTGGCAGAAT
 A C G T A C G T C G T A A C G T A G T C A C G T T A G C C A G T A C T G C T A G A T G C C G T A A C G T A G T C A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATCTCTGGCATCT
CTGTCTGTCACCT
 C G T A A C G T A G T C A C G T T A G C C A G T A C T G C T A G A T G C C G T A A C G T A G T C A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ATCTCTGGCATCT
-GGTCTGGCAT--
 C G T A A C G T A G T C A C G T T A G C C A G T A C T G C T A G A T G C C G T A A C G T A G T C A C G T
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATCTCTGGCATCT
-TGTCTGDCACCT
 C G T A A C G T A G T C A C G T T A G C C A G T A C T G C T A G A T G C C G T A A C G T A G T C A C G T
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----ATCTCTGGCATCT
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C G T T A G C C A G T A C T G C T A G A T G C C G T A A C G T A G T C A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ATCTCTGGCATCT---
AATCCCTTTGATCTATC
 A C G T C G T A A C G T A G T C A C G T T A G C C A G T A C T G C T A G A T G C C G T A A C G T A G T C A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ATCTCTGGCATCT
-TNCCTTTGATGT
 C G T A A C G T A G T C A C G T T A G C C A G T A C T G C T A G A T G C C G T A A C G T A G T C A C G T
A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

PB0126.1_Gata5_2/Jaspar

Match Rank:9
Score:0.52
Offset:-8
Orientation:reverse strand
Alignment:--------ATCTCTGGCATCT
NNNCTGATATCTCNNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C G T T A G C C A G T A C T G C T A G A T G C C G T A A C G T A G T C A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:ATCTCTGGCATCT--
-TNCCTTTGATCTTN
 C G T A A C G T A G T C A C G T T A G C C A G T A C T G C T A G A T G C C G T A A C G T A G T C A C G T A C G T A C G T
A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T