Information for 14-CCAATTGTGTCAA (Motif 27)

A G T C A G T C C G T A G T C A A C G T A C G T A C T G A C G T C A T G A C G T A G T C G C T A C G T A
Reverse Opposite:
C G A T C A G T A C T G C G T A G T A C C G T A A G T C C G T A G T C A A C G T A C G T A C T G A C T G
p-value:1e-10
log p-value:-2.482e+01
Information Content per bp:1.925
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.2 +/- 21.4bp
Average Position of motif in Background57.8 +/- 9.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CCAATTGTGTCAA
NNNCCATTGTGTNAN
 A C G T A C G T A G T C A G T C C G T A G T C A A C G T A C G T A C T G A C G T C A T G A C G T A G T C G C T A C G T A
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PB0183.1_Sry_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCAATTGTGTCAA--
CNNNTATTGTTCNNNNN
 A C G T A C G T A G T C A G T C C G T A G T C A A C G T A C G T A C T G A C G T C A T G A C G T A G T C G C T A C G T A A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCAATTGTGTCAA
-CCATTGTTNY--
 A G T C A G T C C G T A G T C A A C G T A C G T A C T G A C G T C A T G A C G T A G T C G C T A C G T A
A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCAATTGTGTCAA--
AATCAATTGTTCCGCTA
 A C G T A C G T A G T C A G T C C G T A G T C A A C G T A C G T A C T G A C G T C A T G A C G T A G T C G C T A C G T A A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

DMRT3/MA0610.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCAATTGTGTCAA-
---AATGTATCAAT
 A G T C A G T C C G T A G T C A A C G T A C G T A C T G A C G T C A T G A C G T A G T C G C T A C G T A A C G T
A C G T A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCAATTGTGTCAA
-CCATTGTTYB--
 A G T C A G T C C G T A G T C A A C G T A C G T A C T G A C G T C A T G A C G T A G T C G C T A C G T A
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:7
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CCAATTGTGTCAA
-----TGAGTCA-
 A G T C A G T C C G T A G T C A A C G T A C G T A C T G A C G T C A T G A C G T A G T C G C T A C G T A
A C G T A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T

SOX9/MA0077.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCAATTGTGTCAA
-CCATTGTTC---
 A G T C A G T C C G T A G T C A A C G T A C G T A C T G A C G T C A T G A C G T A G T C G C T A C G T A
A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T

PH0009.1_Bsx/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCAATTGTGTCAA
CAGGTAATTACCTCAG
 A C G T A C G T A C G T A G T C A G T C C G T A G T C A A C G T A C G T A C T G A C G T C A T G A C G T A G T C G C T A C G T A
T G A C T G C A C T A G C A T G G A C T T G C A G T C A A C G T A C G T C T G A A T G C G A T C A G C T T A G C C T G A C T A G

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCAATTGTGTCAA-
AAAATTGTTATGAA
 A G T C A G T C C G T A G T C A A C G T A C G T A C T G A C G T C A T G A C G T A G T C G C T A C G T A A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A