Information for 19-AATGGTAGAAGTTGTG (Motif 21)

C T G A G T C A A C G T A C T G C T A G A C G T C G T A A T C G G T C A C T G A A C T G G A C T A C G T A C T G C G A T A C T G
Reverse Opposite:
A G T C C G T A G T A C C G T A C G T A A G T C A G C T A C G T A T G C C G A T T C G A A G T C A G T C C G T A A C G T A G C T
p-value:1e-11
log p-value:-2.545e+01
Information Content per bp:1.745
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.2 +/- 28.5bp
Average Position of motif in Background48.3 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-AATGGTAGAAGTTGTG
TAATGGCGGNC------
 A C G T C T G A G T C A A C G T A C T G C T A G A C G T C G T A A T C G G T C A C T G A A C T G G A C T A C G T A C T G C G A T A C T G
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.49
Offset:-7
Orientation:reverse strand
Alignment:-------AATGGTAGAAGTTGTG
NNTNNACAATGGGANNN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G T C A A C G T A C T G C T A G A C G T C G T A A T C G G T C A C T G A A C T G G A C T A C G T A C T G C G A T A C T G
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----AATGGTAGAAGTTGTG
CAATCACTGGCAGAAT-----
 A C G T A C G T A C G T A C G T A C G T C T G A G T C A A C G T A C T G C T A G A C G T C G T A A T C G G T C A C T G A A C T G G A C T A C G T A C T G C G A T A C T G
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:4
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---AATGGTAGAAGTTGTG
GKTAATGR-----------
 A C G T A C G T A C G T C T G A G T C A A C G T A C T G C T A G A C G T C G T A A T C G G T C A C T G A A C T G G A C T A C G T A C T G C G A T A C T G
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---AATGGTAGAAGTTGTG
GTTAATGGCC---------
 A C G T A C G T A C G T C T G A G T C A A C G T A C T G C T A G A C G T C G T A A T C G G T C A C T G A A C T G G A C T A C G T A C T G C G A T A C T G
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.47
Offset:-3
Orientation:forward strand
Alignment:---AATGGTAGAAGTTGTG
CAAGATGGCGGC-------
 A C G T A C G T A C G T C T G A G T C A A C G T A C T G C T A G A C G T C G T A A T C G G T C A C T G A A C T G G A C T A C G T A C T G C G A T A C T G
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:7
Score:0.47
Offset:-2
Orientation:reverse strand
Alignment:--AATGGTAGAAGTTGTG
NNANTGATTGATNTTN--
 A C G T A C G T C T G A G T C A A C G T A C T G C T A G A C G T C G T A A T C G G T C A C T G A A C T G G A C T A C G T A C T G C G A T A C T G
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.47
Offset:-5
Orientation:reverse strand
Alignment:-----AATGGTAGAAGTTGTG
VRAACAATGG-----------
 A C G T A C G T A C G T A C G T A C G T C T G A G T C A A C G T A C T G C T A G A C G T C G T A A T C G G T C A C T G A A C T G G A C T A C G T A C T G C G A T A C T G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:9
Score:0.47
Offset:-3
Orientation:reverse strand
Alignment:---AATGGTAGAAGTTGTG
NNNANTGA-----------
 A C G T A C G T A C G T C T G A G T C A A C G T A C T G C T A G A C G T C G T A A T C G G T C A C T G A A C T G G A C T A C G T A C T G C G A T A C T G
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.47
Offset:-2
Orientation:reverse strand
Alignment:--AATGGTAGAAGTTGTG
TGATTGGCTANN------
 A C G T A C G T C T G A G T C A A C G T A C T G C T A G A C G T C G T A A T C G G T C A C T G A A C T G G A C T A C G T A C T G C G A T A C T G
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T