Information for 18-TGCAAGCAACHAAAGG (Motif 20)

A C G T A C T G G T A C C G T A C G T A A C T G G T A C G T C A C G T A A G T C G A T C C G T A G T C A C G T A A T C G A T C G
Reverse Opposite:
A T G C A T G C C G A T A C G T A C G T C A T G C T A G A C G T A C G T A C T G G T A C C G A T C G A T A C T G G T A C C G T A
p-value:1e-11
log p-value:-2.545e+01
Information Content per bp:1.766
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.8 +/- 20.2bp
Average Position of motif in Background45.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hmx1/MA0896.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGCAAGCAACHAAAGG--
-ACAAGCAATTAATGAAT
 A C G T A C T G G T A C C G T A C G T A A C T G G T A C G T C A C G T A A G T C G A T C C G T A G T C A C G T A A T C G A T C G A C G T A C G T
A C G T T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGCAAGCAACHAAAGG--
-ACAAGCAATTAATGAAT
 A C G T A C T G G T A C C G T A C G T A A C T G G T A C G T C A C G T A A G T C G A T C C G T A G T C A C G T A A T C G A T C G A C G T A C G T
A C G T T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

Hmx2/MA0897.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGCAAGCAACHAAAGG--
-ACAAGCAATTAAAGAAT
 A C G T A C T G G T A C C G T A C G T A A C T G G T A C G T C A C G T A A G T C G A T C C G T A G T C A C G T A A T C G A T C G A C G T A C G T
A C G T T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0042.1_Hmx2/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGCAAGCAACHAAAGG--
-ACAAGCAATTAAAGAAT
 A C G T A C T G G T A C C G T A C G T A A C T G G T A C G T C A C G T A A G T C G A T C C G T A G T C A C G T A A T C G A T C G A C G T A C G T
A C G T T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

Hmx3/MA0898.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGCAAGCAACHAAAGG--
-ACAAGCAATTAAAGAAT
 A C G T A C T G G T A C C G T A C G T A A C T G G T A C G T C A C G T A A G T C G A T C C G T A G T C A C G T A A T C G A T C G A C G T A C G T
A C G T T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0043.1_Hmx3/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGCAAGCAACHAAAGG--
-ACAAGCAATTAAAGAAT
 A C G T A C T G G T A C C G T A C G T A A C T G G T A C G T C A C G T A A G T C G A T C C G T A G T C A C G T A A T C G A T C G A C G T A C G T
A C G T T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PBX1/MA0070.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGCAAGCAACHAAAGG
--CCATCAATCAAA--
 A C G T A C T G G T A C C G T A C G T A A C T G G T A C G T C A C G T A A G T C G A T C C G T A G T C A C G T A A T C G A T C G
A C G T A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGCAAGCAACHAAAGG
AACAAACAACAAGAG-
 A C G T A C T G G T A C C G T A C G T A A C T G G T A C G T C A C G T A A G T C G A T C C G T A G T C A C G T A A T C G A T C G
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TGCAAGCAACHAAAGG
-----CCAATCAA---
 A C G T A C T G G T A C C G T A C G T A A C T G G T A C G T C A C G T A A G T C G A T C C G T A G T C A C G T A A T C G A T C G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TGCAAGCAACHAAAGG
---AAGCCATAAAA--
 A C G T A C T G G T A C C G T A C G T A A C T G G T A C G T C A C G T A A G T C G A T C C G T A G T C A C G T A A T C G A T C G
A C G T A C G T A C G T T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T