Information for 9-CATTTTAAAGTTT (Motif 19)

G T A C C G T A A C G T A G C T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C G T A G C T
Reverse Opposite:
C T G A C G T A G T C A A G T C A C G T A C G T A C G T C G T A C G T A C T G A C G T A A C G T A C T G
p-value:1e-11
log p-value:-2.545e+01
Information Content per bp:1.934
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.4 +/- 30.5bp
Average Position of motif in Background58.9 +/- 3.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CATTTTAAAGTTT----
----TTAATGTTTAACC
 G T A C C G T A A C G T A G C T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C G T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

TATA-Box(TBP)/Promoter/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CATTTTAAAGTTT
CCTTTTATAGNC-
 G T A C C G T A A C G T A G C T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C G T A G C T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CATTTTAAAGTTT
-ACATCAAAGG--
 G T A C C G T A A C G T A G C T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C G T A G C T
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CATTTTAAAGTTT
--ATTTGAATT--
 G T A C C G T A A C G T A G C T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C G T A G C T
A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CATTTTAAAGTTT
CGGTTTCAAA----
 A C G T G T A C C G T A A C G T A G C T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C G T A G C T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CATTTTAAAGTTT
TGTTCCCATTGTGTACT--
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C G T A G C T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C G T A G C T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T A C G T A C G T

MYBL2/MA0777.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CATTTTAAAGTTT
GACNGTTTAACGGTT
 A C G T A C G T G T A C C G T A A C G T A G C T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C G T A G C T
C T A G C T G A T A G C T A G C A C T G C G A T A C G T G C A T C T G A G T C A G A T C A T C G A C T G G A C T G A C T

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CATTTTAAAGTTT
NNNNNNCTTTTATAN---
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C G T A G C T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C G T A G C T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CATTTTAAAGTTT
NNNNNNCTTTTATAN---
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C G T A G C T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C G T A G C T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CATTTTAAAGTTT
-ACWTCAAAGG--
 G T A C C G T A A C G T A G C T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C G T A G C T
A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T