Information for 17-ATCTGAAGCCCTTGAG (Motif 17)

G T C A C G A T A G T C A C G T A T C G C G T A C T G A A C T G G T A C G T A C A G T C C G A T A G C T A T C G C G T A A C T G
Reverse Opposite:
A G T C A C G T A T G C C T G A C G T A C T A G A C T G A C T G A G T C A G C T C G A T A T G C C G T A A C T G C G T A A C G T
p-value:1e-11
log p-value:-2.724e+01
Information Content per bp:1.800
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.5 +/- 16.6bp
Average Position of motif in Background37.1 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0112.1_Nkx2-3/Jaspar

Match Rank:1
Score:0.51
Offset:1
Orientation:forward strand
Alignment:ATCTGAAGCCCTTGAG-
-CTTTAAGTACTTAATG
 G T C A C G A T A G T C A C G T A T C G C G T A C T G A A C T G G T A C G T A C A G T C C G A T A G C T A T C G C G T A A C T G A C G T
A C G T G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:ATCTGAAGCCCTTGAG
---NGAAGC-------
 G T C A C G A T A G T C A C G T A T C G C G T A C T G A A C T G G T A C G T A C A G T C C G A T A G C T A T C G C G T A A C T G
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.51
Offset:6
Orientation:forward strand
Alignment:ATCTGAAGCCCTTGAG
------RSCACTYRAG
 G T C A C G A T A G T C A C G T A T C G C G T A C T G A A C T G G T A C G T A C A G T C C G A T A G C T A T C G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:ATCTGAAGCCCTTGAG
------NSCACTYVAV
 G T C A C G A T A G T C A C G T A T C G C G T A C T G A A C T G G T A C G T A C A G T C C G A T A G C T A T C G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

PH0116.1_Nkx2-9/Jaspar

Match Rank:5
Score:0.50
Offset:1
Orientation:forward strand
Alignment:ATCTGAAGCCCTTGAG--
-TTTTAAGTACTTAAATT
 G T C A C G A T A G T C A C G T A T C G C G T A C T G A A C T G G T A C G T A C A G T C C G A T A G C T A T C G C G T A A C T G A C G T A C G T
A C G T C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.49
Offset:7
Orientation:forward strand
Alignment:ATCTGAAGCCCTTGAG
-------CCACTTGAA
 G T C A C G A T A G T C A C G T A T C G C G T A C T G A A C T G G T A C G T A C A G T C C G A T A G C T A T C G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

PH0111.1_Nkx2-2/Jaspar

Match Rank:7
Score:0.49
Offset:3
Orientation:forward strand
Alignment:ATCTGAAGCCCTTGAG----
---ATAACCACTTGAAAATT
 G T C A C G A T A G T C A C G T A T C G C G T A C T G A A C T G G T A C G T A C A G T C C G A T A G C T A T C G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

PB0051.1_Osr2_1/Jaspar

Match Rank:8
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---ATCTGAAGCCCTTGAG
ATGTACAGTAGCAAAG---
 A C G T A C G T A C G T G T C A C G A T A G T C A C G T A T C G C G T A C T G A A C T G G T A C G T A C A G T C C G A T A G C T A T C G C G T A A C T G
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---ATCTGAAGCCCTTGAG
ATTTACAGTAGCAAAA---
 A C G T A C G T A C G T G T C A C G A T A G T C A C G T A T C G C G T A C T G A A C T G G T A C G T A C A G T C C G A T A G C T A T C G C G T A A C T G
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:10
Score:0.47
Offset:-2
Orientation:reverse strand
Alignment:--ATCTGAAGCCCTTGAG
CCACCTGTTGCAT-----
 A C G T A C G T G T C A C G A T A G T C A C G T A T C G C G T A C T G A A C T G G T A C G T A C A G T C C G A T A G C T A T C G C G T A A C T G
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T