Information for 13-CTTBCTCAAAGTCTGC (Motif 14)

A G T C A G C T A C G T A C T G G T A C A C G T A G T C G T C A G T C A C T G A C T A G A C G T A G T C A C G T A C T G A G T C
Reverse Opposite:
A C T G G T A C G T C A C T A G C G T A A G T C A G C T A C G T A C G T C T A G G T C A A C T G T G A C G T C A C T G A A C T G
p-value:1e-12
log p-value:-2.942e+01
Information Content per bp:1.730
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.8 +/- 27.4bp
Average Position of motif in Background30.8 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.48
Offset:6
Orientation:forward strand
Alignment:CTTBCTCAAAGTCTGC--
------CAACGTCCGCGG
 A G T C A G C T A C G T A C T G G T A C A C G T A G T C G T C A G T C A C T G A C T A G A C G T A G T C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

ESRRB/MA0141.3/Jaspar

Match Rank:2
Score:0.46
Offset:5
Orientation:forward strand
Alignment:CTTBCTCAAAGTCTGC
-----TCAAGGTCATA
 A G T C A G C T A C G T A C T G G T A C A C G T A G T C G T C A G T C A C T G A C T A G A C G T A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Esrra/MA0592.2/Jaspar

Match Rank:3
Score:0.46
Offset:4
Orientation:forward strand
Alignment:CTTBCTCAAAGTCTGC
----TTCAAGGTCAT-
 A G T C A G C T A C G T A C T G G T A C A C G T A G T C G T C A G T C A C T G A C T A G A C G T A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:4
Score:0.45
Offset:2
Orientation:forward strand
Alignment:CTTBCTCAAAGTCTGC---
--TATTCAAGGTCATGCGA
 A G T C A G C T A C G T A C T G G T A C A C G T A G T C G T C A G T C A C T G A C T A G A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.45
Offset:4
Orientation:forward strand
Alignment:CTTBCTCAAAGTCTGC
----NTCAAGGTCA--
 A G T C A G C T A C G T A C T G G T A C A C G T A G T C G T C A G T C A C T G A C T A G A C G T A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.45
Offset:4
Orientation:forward strand
Alignment:CTTBCTCAAAGTCTGC
----BTCAAGGTCA--
 A G T C A G C T A C G T A C T G G T A C A C G T A G T C G T C A G T C A C T G A C T A G A C G T A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.45
Offset:0
Orientation:reverse strand
Alignment:CTTBCTCAAAGTCTGC----
NTGACTCANTTTTTCCANTN
 A G T C A G C T A C G T A C T G G T A C A C G T A G T C G T C A G T C A C T G A C T A G A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.44
Offset:5
Orientation:forward strand
Alignment:CTTBCTCAAAGTCTGC
-----TCAAGGTCAT-
 A G T C A G C T A C G T A C T G G T A C A C G T A G T C G T C A G T C A C T G A C T A G A C G T A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.44
Offset:-2
Orientation:reverse strand
Alignment:--CTTBCTCAAAGTCTGC
CACTTCCTCT--------
 A C G T A C G T A G T C A G C T A C G T A C T G G T A C A C G T A G T C G T C A G T C A C T G A C T A G A C G T A G T C A C G T A C T G A G T C
A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.44
Offset:10
Orientation:reverse strand
Alignment:CTTBCTCAAAGTCTGC-----
----------GTCAGCANNTN
 A G T C A G C T A C G T A C T G G T A C A C G T A G T C G T C A G T C A C T G A C T A G A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T