Information for 5-TKGCAGGAGGTCA (Motif 7)

C G A T A C G T A T C G A G T C C G T A A C T G A C T G C T G A A C T G A C T G A C G T A T G C C G T A
Reverse Opposite:
A C G T A T C G C G T A A G T C G T A C A G C T A G T C A G T C A C G T A C T G A T G C G T A C C G T A
p-value:1e-12
log p-value:-2.794e+01
Information Content per bp:1.870
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 26.8bp
Average Position of motif in Background65.2 +/- 4.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.71
Offset:5
Orientation:forward strand
Alignment:TKGCAGGAGGTCA
-----AGRGGTCA
 C G A T A C G T A T C G A G T C C G T A A C T G A C T G C T G A A C T G A C T G A C G T A T G C C G T A
A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.66
Offset:7
Orientation:forward strand
Alignment:TKGCAGGAGGTCA
-------AGGTCA
 C G A T A C G T A T C G A G T C C G T A A C T G A C T G C T G A A C T G A C T G A C G T A T G C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TKGCAGGAGGTCA
--ACAGGAAGTG-
 C G A T A C G T A T C G A G T C C G T A A C T G A C T G C T G A A C T G A C T G A C G T A T G C C G T A
A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.65
Offset:5
Orientation:forward strand
Alignment:TKGCAGGAGGTCA
-----TRAGGTCA
 C G A T A C G T A T C G A G T C C G T A A C T G A C T G C T G A A C T G A C T G A C G T A T G C C G T A
A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TKGCAGGAGGTCA
-ANCAGGATGT--
 C G A T A C G T A T C G A G T C C G T A A C T G A C T G C T G A A C T G A C T G A C G T A T G C C G T A
A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TKGCAGGAGGTCA-----
-NTNNNGGGGTCANGNNN
 C G A T A C G T A T C G A G T C C G T A A C T G A C T G C T G A A C T G A C T G A C G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TKGCAGGAGGTCA
--ACAGGAAGTG-
 C G A T A C G T A T C G A G T C C G T A A C T G A C T G C T G A A C T G A C T G A C G T A T G C C G T A
A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.62
Offset:6
Orientation:forward strand
Alignment:TKGCAGGAGGTCA-
------AAGGTCAC
 C G A T A C G T A T C G A G T C C G T A A C T G A C T G C T G A A C T G A C T G A C G T A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TKGCAGGAGGTCA-
TGGCACCATGCCAA
 C G A T A C G T A T C G A G T C C G T A A C T G A C T G C T G A A C T G A C T G A C G T A T G C C G T A A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TKGCAGGAGGTCA-----
-GGCGAGGGGTCAAGGGC
 C G A T A C G T A T C G A G T C C G T A A C T G A C T G C T G A A C T G A C T G A C G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C