Information for 4-GCGRAGGCAGAGCATG (Motif 6)

A C T G A G T C T C A G C T A G C T G A C T A G A C T G A T G C G C T A A C T G C G T A C T A G A T G C C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A T C G A G T C A C G T A G T C C A G T A T C G A G T C A G T C A G C T A G T C A G T C T A C G G T A C
p-value:1e-13
log p-value:-3.150e+01
Information Content per bp:1.785
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 30.3bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCGRAGGCAGAGCATG
---GAGSCCGAGC---
 A C T G A G T C T C A G C T A G C T G A C T A G A C T G A T G C G C T A A C T G C G T A C T A G A T G C C G T A A C G T A C T G
A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCGRAGGCAGAGCATG---
----GAGCACAGCAGGACA
 A C T G A G T C T C A G C T A G C T G A C T A G A C T G A T G C G C T A A C T G C G T A C T A G A T G C C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GCGRAGGCAGAGCATG
-RGKGGGCGGAGC---
 A C T G A G T C T C A G C T A G C T G A C T A G A C T G A T G C G C T A A C T G C G T A C T A G A T G C C G T A A C G T A C T G
A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:GCGRAGGCAGAGCATG
------DCTCAGCAGG
 A C T G A G T C T C A G C T A G C T G A C T A G A C T G A T G C G C T A A C T G C G T A C T A G A T G C C G T A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GCGRAGGCAGAGCATG---
----CCACACAGCAGGAGA
 A C T G A G T C T C A G C T A G C T G A C T A G A C T G A T G C G C T A A C T G C G T A C T A G A T G C C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

NRF(NRF)/Promoter/Homer

Match Rank:6
Score:0.50
Offset:7
Orientation:forward strand
Alignment:GCGRAGGCAGAGCATG---
-------GTGCGCATGCGC
 A C T G A G T C T C A G C T A G C T G A C T A G A C T G A T G C G C T A A C T G C G T A C T A G A T G C C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GCGRAGGCAGAGCATG-
---ATGCCCGGGCATGT
 A C T G A G T C T C A G C T A G C T G A C T A G A C T G A T G C G C T A A C T G C G T A C T A G A T G C C G T A A C G T A C T G A C G T
A C G T A C G T A C G T G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--GCGRAGGCAGAGCATG
GGGNGGGGGCGGGGC---
 A C G T A C G T A C T G A G T C T C A G C T A G C T G A C T A G A C T G A T G C G C T A A C T G C G T A C T A G A T G C C G T A A C G T A C T G
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GCGRAGGCAGAGCATG---
----CCACACAGCAGGAGA
 A C T G A G T C T C A G C T A G C T G A C T A G A C T G A T G C G C T A A C T G C G T A C T A G A T G C C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GCGRAGGCAGAGCATG
GGCGGGGGCGGGGG---
 A C G T A C T G A G T C T C A G C T A G C T G A C T A G A C T G A T G C G C T A A C T G C G T A C T A G A T G C C G T A A C G T A C T G
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T A C G T A C G T