Information for 8-GAGGTGCAGACAG (Motif 18)

A C T G C G T A A C T G A C T G A C G T A C T G G T A C C G T A C A T G C G T A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G A T G A T C A C G T A C T G A G T C C G T A A G T C G T A C A C G T A G T C
p-value:1e-9
log p-value:-2.210e+01
Information Content per bp:1.912
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.4 +/- 26.6bp
Average Position of motif in Background53.6 +/- 5.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GAGGTGCAGACAG-
--GGTGYTGACAGS
 A C T G C G T A A C T G A C T G A C G T A C T G G T A C C G T A C A T G C G T A A G T C C G T A A C T G A C G T
A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GAGGTGCAGACAG
-----CCAGACAG
 A C T G C G T A A C T G A C T G A C G T A C T G G T A C C G T A C A T G C G T A A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAGGTGCAGACAG--
TACATGTGCACATAAAA
 A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C T G G T A C C G T A C A T G C G T A A G T C C G T A A C T G A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GAGGTGCAGACAG--
-----CCAGACRSVB
 A C T G C G T A A C T G A C T G A C G T A C T G G T A C C G T A C A T G C G T A A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GAGGTGCAGACAG
ATCCACAGGTGCGAAAA-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C T G G T A C C G T A C A T G C G T A A G T C C G T A A C T G
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAGGTGCAGACAG--
CAGATGTGCACATACGT
 A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C T G G T A C C G T A C A T G C G T A A G T C C G T A A C T G A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GAGGTGCAGACAG-
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C T G G T A C C G T A C A T G C G T A A G T C C G T A A C T G A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GAGGTGCAGACAG
-----BCAGACWA
 A C T G C G T A A C T G A C T G A C G T A C T G G T A C C G T A C A T G C G T A A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0117.1_Eomes_2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GAGGTGCAGACAG
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C T G G T A C C G T A C A T G C G T A A G T C C G T A A C T G
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAGGTGCAGACAG
GACAGGTGTN-----
 A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C T G G T A C C G T A C A T G C G T A A G T C C G T A A C T G
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T A C G T A C G T