Information for 6-ATTTAACTACAAG (Motif 7)

C G T A A C G T A C G T C G A T C G T A C G T A A G T C A C G T C G T A T A G C C G T A C T G A A C T G
Reverse Opposite:
G T A C A G C T A C G T A T C G A C G T C G T A A C T G A C G T A C G T C G T A C G T A C G T A A C G T
p-value:1e-11
log p-value:-2.546e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.2 +/- 22.6bp
Average Position of motif in Background79.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0081.1_Tcf1_1/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----ATTTAACTACAAG
ACTTAGTTAACTAAAAA
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G A T C G T A C G T A A G T C A C G T C G T A T A G C C G T A C T G A A C T G
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

PH0167.1_Tcf1/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----ATTTAACTACAAG
CCTTAGTTAACTAAAAT
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G A T C G T A C G T A A G T C A C G T C G T A T A G C C G T A C T G A A C T G
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATTTAACTACAAG
-GTTAACTAGN--
 C G T A A C G T A C G T C G A T C G T A C G T A A G T C A C G T C G T A T A G C C G T A C T G A A C T G
A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATTTAACTACAAG-
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T C G T A A C G T A C G T C G A T C G T A C G T A A G T C A C G T C G T A T A G C C G T A C T G A A C T G A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

PH0038.1_Hlx/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATTTAACTACAAG
CCATAATTAATTACA--
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G A T C G T A C G T A A G T C A C G T C G T A T A G C C G T A C T G A A C T G
G T A C G T A C G T C A G A C T G C T A C G T A G A C T G C A T C T G A C T G A G C A T C G A T C T G A G A T C G T C A A C G T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATTTAACTACAAG
NTTTTACGAC---
 C G T A A C G T A C G T C G A T C G T A C G T A A G T C A C G T C G T A T A G C C G T A C T G A A C T G
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATTTAACTACAAG
TTTTTATTGC---
 C G T A A C G T A C G T C G A T C G T A C G T A A G T C A C G T C G T A T A G C C G T A C T G A A C T G
C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T A C G T A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATTTAACTACAAG
NTTTTACGAC---
 C G T A A C G T A C G T C G A T C G T A C G T A A G T C A C G T C G T A T A G C C G T A C T G A A C T G
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATTTAACTACAAG--
GANGTTAACTAGTTTNN
 A C G T A C G T C G T A A C G T A C G T C G A T C G T A C G T A A G T C A C G T C G T A T A G C C G T A C T G A A C T G A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PROP1/MA0715.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATTTAACTACAAG
TAATTTAATTA----
 A C G T A C G T C G T A A C G T A C G T C G A T C G T A C G T A A G T C A C G T C G T A T A G C C G T A C T G A A C T G
G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A A C G T A C G T A C G T A C G T