Information for 5-CACTGSCTGTCAA (Motif 4)

A G T C C G T A T A G C A C G T A C T G A T G C A G T C A C G T A C T G A C G T G T A C C G T A T C G A
Reverse Opposite:
A G C T A C G T A C T G G T C A A G T C C G T A A C T G A T C G A G T C G T C A A T C G A C G T A C T G
p-value:1e-14
log p-value:-3.263e+01
Information Content per bp:1.820
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.3 +/- 21.1bp
Average Position of motif in Background48.3 +/- 43.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0141.1_Pknox2/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CACTGSCTGTCAA---
AAGCACCTGTCAATAT
 A G T C C G T A T A G C A C G T A C T G A T G C A G T C A C G T A C T G A C G T G T A C C G T A T C G A A C G T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.74
Offset:5
Orientation:reverse strand
Alignment:CACTGSCTGTCAA
-----GCTGTCAA
 A G T C C G T A T A G C A C G T A C T G A T G C A G T C A C G T A C T G A C G T G T A C C G T A T C G A
A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.71
Offset:4
Orientation:forward strand
Alignment:CACTGSCTGTCAA-
----VGCTGWCAVB
 A G T C C G T A T A G C A C G T A C T G A T G C A G T C A C G T A C T G A C G T G T A C C G T A T C G A A C G T
A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

PH0105.1_Meis3/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CACTGSCTGTCAA---
AATTACCTGTCAATAC
 A G T C C G T A T A G C A C G T A C T G A T G C A G T C A C G T A C T G A C G T G T A C C G T A T C G A A C G T A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:CACTGSCTGTCAA
-----CCTGTCAA
 A G T C C G T A T A G C A C G T A C T G A T G C A G T C A C G T A C T G A C G T G T A C C G T A T C G A
A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

PH0170.1_Tgif2/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CACTGSCTGTCAA---
AACTAGCTGTCAATAC
 A G T C C G T A T A G C A C G T A C T G A T G C A G T C A C G T A C T G A C G T G T A C C G T A T C G A A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:7
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CACTGSCTGTCAA---
----GSCTGTCACTCA
 A G T C C G T A T A G C A C G T A C T G A T G C A G T C A C G T A C T G A C G T G T A C C G T A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

PH0104.1_Meis2/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CACTGSCTGTCAA---
AAAGACCTGTCAATAC
 A G T C C G T A T A G C A C G T A C T G A T G C A G T C A C G T A C T G A C G T G T A C C G T A T C G A A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:CACTGSCTGTCAA
------NTGTCAN
 A G T C C G T A T A G C A C G T A C T G A T G C A G T C A C G T A C T G A C G T G T A C C G T A T C G A
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

PH0102.1_Meis1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CACTGSCTGTCAA---
AACGAGCTGTCAATAC
 A G T C C G T A T A G C A C G T A C T G A T G C A G T C A C G T A C T G A C G T G T A C C G T A T C G A A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C