Information for 22-CAAGCTGCTATGA (Motif 31)

G A T C G T C A C T G A C T A G T G A C C G A T T A C G T A G C C A G T G T C A C A G T A C T G C G T A
Reverse Opposite:
G A C T A G T C G T C A A C G T G C T A A C T G A T G C C G T A A C T G A G T C A G C T A C G T C T A G
p-value:1e-6
log p-value:-1.530e+01
Information Content per bp:1.691
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif105.6
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets47.8 +/- 24.8bp
Average Position of motif in Background51.2 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0055.1_Rfx4_1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAAGCTGCTATGA--
NNCGTTGCTATGGNN
 G A T C G T C A C T G A C T A G T G A C C G A T T A C G T A G C C A G T G T C A C A G T A C T G C G T A A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAAGCTGCTATGA
-CTGTTGCTAGGS
 G A T C G T C A C T G A C T A G T G A C C G A T T A C G T A G C C A G T G T C A C A G T A C T G C G T A
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CAAGCTGCTATGA----
--KGTTGCTAGGMAACA
 G A T C G T C A C T G A C T A G T G A C C G A T T A C G T A G C C A G T G T C A C A G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAAGCTGCTATGA
-CAGCTGNT----
 G A T C G T C A C T G A C T A G T G A C C G A T T A C G T A G C C A G T G T C A C A G T A C T G C G T A
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAAGCTGCTATGA
CCAGCTGTTN---
 G A T C G T C A C T G A C T A G T G A C C G A T T A C G T A G C C A G T G T C A C A G T A C T G C G T A
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CAAGCTGCTATGA--
NCCGTTGCTANGNGN
 G A T C G T C A C T G A C T A G T G A C C G A T T A C G T A G C C A G T G T C A C A G T A C T G C G T A A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CAAGCTGCTATGA------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T G A T C G T C A C T G A C T A G T G A C C G A T T A C G T A G C C A G T G T C A C A G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAAGCTGCTATGA
CAAGCTT------
 G A T C G T C A C T G A C T A G T G A C C G A T T A C G T A G C C A G T G T C A C A G T A C T G C G T A
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAAGCTGCTATGA
AGCAGCTGCT----
 A C G T G A T C G T C A C T G A C T A G T G A C C G A T T A C G T A G C C A G T G T C A C A G T A C T G C G T A
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAAGCTGCTATGA
-AAGGTGTKAA--
 G A T C G T C A C T G A C T A G T G A C C G A T T A C G T A G C C A G T G T C A C A G T A C T G C G T A
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T