Information for 15-AGAGCCAGGGMAAGGA (Motif 26)

C G T A T C A G C G T A A C T G A T G C T A G C C T G A A C T G C A T G A T C G G T C A C T G A C G T A A C T G C T A G C G T A
Reverse Opposite:
A C G T A G T C A G T C C G A T A G C T C A G T A T G C G T A C T G A C G A C T A T C G A T C G G T A C G C A T A G T C G C A T
p-value:1e-8
log p-value:-1.852e+01
Information Content per bp:1.665
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif95.8
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets59.9 +/- 22.2bp
Average Position of motif in Background53.2 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AGAGCCAGGGMAAGGA--
--AAACAGACAAAGGAAT
 C G T A T C A G C G T A A C T G A T G C T A G C C T G A A C T G C A T G A T C G G T C A C T G A C G T A A C T G C T A G C G T A A C G T A C G T
A C G T A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:AGAGCCAGGGMAAGGA
-ATGCCCGGGCATGT-
 C G T A T C A G C G T A A C T G A T G C T A G C C T G A A C T G C A T G A T C G G T C A C T G A C G T A A C T G C T A G C G T A
A C G T G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.49
Offset:6
Orientation:forward strand
Alignment:AGAGCCAGGGMAAGGA--
------AGGTCAAGGTCA
 C G T A T C A G C G T A A C T G A T G C T A G C C T G A A C T G C A T G A T C G G T C A C T G A C G T A A C T G C T A G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:AGAGCCAGGGMAAGGA
---GAAAGTGAAAGT-
 C G T A T C A G C G T A A C T G A T G C T A G C C T G A A C T G C A T G A T C G G T C A C T G A C G T A A C T G C T A G C G T A
A C G T A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:5
Score:0.47
Offset:2
Orientation:forward strand
Alignment:AGAGCCAGGGMAAGGA-
--AGAAAGTGAAAGTGA
 C G T A T C A G C G T A A C T G A T G C T A G C C T G A A C T G C A T G A T C G G T C A C T G A C G T A A C T G C T A G C G T A A C G T
A C G T A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.46
Offset:-2
Orientation:forward strand
Alignment:--AGAGCCAGGGMAAGGA--
NTNATGCAAYMNNHTGMAAY
 A C G T A C G T C G T A T C A G C G T A A C T G A T G C T A G C C T G A A C T G C A T G A T C G G T C A C T G A C G T A A C T G C T A G C G T A A C G T A C G T
T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.46
Offset:9
Orientation:reverse strand
Alignment:AGAGCCAGGGMAAGGA-----
---------NDCAGGAARTNN
 C G T A T C A G C G T A A C T G A T G C T A G C C T G A A C T G C A T G A T C G G T C A C T G A C G T A A C T G C T A G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.46
Offset:4
Orientation:reverse strand
Alignment:AGAGCCAGGGMAAGGA--------
----YCAGGCWCAGTACCAGGCTC
 C G T A T C A G C G T A A C T G A T G C T A G C C T G A A C T G C A T G A T C G G T C A C T G A C G T A A C T G C T A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

PB0028.1_Hbp1_1/Jaspar

Match Rank:9
Score:0.46
Offset:4
Orientation:forward strand
Alignment:AGAGCCAGGGMAAGGA----
----ACTATGAATGAATGAT
 C G T A T C A G C G T A A C T G A T G C T A G C C T G A A C T G C A T G A T C G G T C A C T G A C G T A A C T G C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.46
Offset:0
Orientation:forward strand
Alignment:AGAGCCAGGGMAAGGA
AGAGCGGGGTCAAGTA
 C G T A T C A G C G T A A C T G A T G C T A G C C T G A A C T G C A T G A T C G G T C A C T G A C G T A A C T G C T A G C G T A
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A