Information for 15-TCCATTGGTTTGG (Motif 22)

A C G T A T G C A G T C C G T A A C G T A C G T A C T G C T A G A C G T A C G T A C G T C T A G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A C G T A A G T C A G T C C G T A C G T A A C G T A C T G A T C G G T C A
p-value:1e-8
log p-value:-1.972e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.5 +/- 26.7bp
Average Position of motif in Background91.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TCCATTGGTTTGG
-CCATTGTTYB--
 A C G T A T G C A G T C C G T A A C G T A C G T A C T G C T A G A C G T A C G T A C G T C T A G A C T G
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TCCATTGGTTTGG
-CCATTGTTC---
 A C G T A T G C A G T C C G T A A C G T A C G T A C T G C T A G A C G T A C G T A C G T C T A G A C T G
A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCCATTGGTTTGG
-CCATTGTTTT--
 A C G T A T G C A G T C C G T A A C G T A C G T A C T G C T A G A C G T A C G T A C G T C T A G A C T G
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCCATTGGTTTGG
CCGATTGGCT---
 A C G T A T G C A G T C C G T A A C G T A C G T A C T G C T A G A C G T A C G T A C G T C T A G A C T G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCCATTGGTTTGG
-TGATTGGCTANN
 A C G T A T G C A G T C C G T A A C G T A C G T A C T G C T A G A C G T A C G T A C G T C T A G A C T G
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCCATTGGTTTGG----
NNCTTTGTTTTGNTNNN
 A C G T A T G C A G T C C G T A A C G T A C G T A C T G C T A G A C G T A C G T A C G T C T A G A C T G A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCCATTGGTTTGG
NCCATTGTTY---
 A C G T A T G C A G T C C G T A A C G T A C G T A C T G C T A G A C G T A C G T A C G T C T A G A C T G
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCCATTGGTTTGG
NCCATTGTTC---
 A C G T A T G C A G T C C G T A A C G T A C G T A C T G C T A G A C G T A C G T A C G T C T A G A C T G
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCCATTGGTTTGG-----
-NNNTTGGTTTCGNTNNN
 A C G T A T G C A G T C C G T A A C G T A C G T A C T G C T A G A C G T A C G T A C G T C T A G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TCCATTGGTTTGG
---ATTGATTYND
 A C G T A T G C A G T C C G T A A C G T A C G T A C T G C T A G A C G T A C G T A C G T C T A G A C T G
A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T