Information for 13-ATGGCCAGRCTTY (Motif 18)

C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C T G C T A G A T G C A C G T A C G T A G T C
Reverse Opposite:
C T A G C G T A C G T A A T C G A G T C A G T C C G A T A C T G A C T G G T A C A G T C C G T A A C G T
p-value:1e-8
log p-value:-1.999e+01
Information Content per bp:1.912
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.4 +/- 31.9bp
Average Position of motif in Background35.6 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATGGCCAGRCTTY
-TGCCCAGNHW--
 C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C T G C T A G A T G C A C G T A C G T A G T C
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATGGCCAGRCTTY
ACATGCCCGGGCAT-
 A C G T A C G T C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C T G C T A G A T G C A C G T A C G T A G T C
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ATGGCCAGRCTTY---
CAAATCCAGACATCACA
 A C G T C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C T G C T A G A T G C A C G T A C G T A G T C A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----ATGGCCAGRCTTY
GTTAATGGCC-------
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C T G C T A G A T G C A C G T A C G T A G T C
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TP53/MA0106.3/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ATGGCCAGRCTTY--
AACATGCCCGGGCATGTC
 A C G T A C G T A C G T C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C T G C T A G A T G C A C G T A C G T A G T C A C G T A C G T
C T G A C T G A G A T C C G T A G C A T T C A G G A T C G A T C A G T C C T A G C T A G C T A G A T G C G C T A G C A T C T A G G A C T G A T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:ATGGCCAGRCTTY
----BCAGACWA-
 C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C T G C T A G A T G C A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:ATGGCCAGRCTTY
----CCAGACAG-
 C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C T G C T A G A T G C A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---ATGGCCAGRCTTY----
AACATGCCCAGACATGCCCN
 A C G T A C G T A C G T C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C T G C T A G A T G C A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C C A G T

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---ATGGCCAGRCTTY----
AACATGCCCAGACATGCCCN
 A C G T A C G T A C G T C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C T G C T A G A T G C A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C C A G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:ATGGCCAGRCTTY
-ATGCCAGACN--
 C G T A A C G T A C T G A C T G A G T C A G T C C G T A A C T G C T A G A T G C A C G T A C G T A G T C
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T