Information for 5-TGGTATGCACAGC (Motif 6)

A C G T A C T G A C T G A C G T C G T A A C G T A C T G G T A C C G T A G T A C C T G A A C T G A G T C
Reverse Opposite:
A C T G G T A C A G C T A C T G A C G T A C T G A G T C C G T A A C G T C G T A A G T C A G T C C G T A
p-value:1e-10
log p-value:-2.532e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.2 +/- 23.3bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGGTATGCACAGC
CCATTGTATGCAAAT-
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C G T A C T G G T A C C G T A G T A C C T G A A C T G A G T C
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGGTATGCACAGC
TGGAATGT-----
 A C G T A C T G A C T G A C G T C G T A A C G T A C T G G T A C C G T A G T A C C T G A A C T G A G T C
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGGTATGCACAGC
CTTTGTTATGCAAAT-
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C G T A C T G G T A C C G T A G T A C C T G A A C T G A G T C
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGGTATGCACAGC
NTGGAATGTG----
 A C G T A C G T A C T G A C T G A C G T C G T A A C G T A C T G G T A C C G T A G T A C C T G A A C T G A G T C
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGGTATGCACAGC
CATTGTTATGCAAAT-
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C G T A C T G G T A C C G T A G T A C C T G A A C T G A G T C
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGGTATGCACAGC
CCWGGAATGY-----
 A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C G T A C T G G T A C C G T A G T A C C T G A A C T G A G T C
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGGTATGCACAGC---
TTGTATGCAAATTAGA
 A C G T A C T G A C T G A C G T C G T A A C G T A C T G G T A C C G T A G T A C C T G A A C T G A G T C A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGGTATGCACAGC---
TTGTATGCAAATTAGA
 A C G T A C T G A C T G A C G T C G T A A C G T A C T G G T A C C G T A G T A C C T G A A C T G A G T C A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

POU3F4/MA0789.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGGTATGCACAGC
---TATGCAAAT-
 A C G T A C T G A C T G A C G T C G T A A C G T A C T G G T A C C G T A G T A C C T G A A C T G A G T C
A C G T A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGGTATGCACAGC
---TATGCAAAT-
 A C G T A C T G A C T G A C G T C G T A A C G T A C T G G T A C C G T A G T A C C T G A A C T G A G T C
A C G T A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T