p-value: | 1e-5 |
log p-value: | -1.266e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.65% |
Number of Background Sequences with motif | 14.0 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 45.2 +/- 32.1bp |
Average Position of motif in Background | 52.6 +/- 30.2bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NKX2-3/MA0672.1/Jaspar
Match Rank: | 1 |
Score: | 0.69 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ACCACTTTTC ACCACTTGAA |
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Nkx3-1/MA0124.2/Jaspar
Match Rank: | 2 |
Score: | 0.69 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ACCACTTTTC ACCACTTAA- |
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NKX3-2/MA0122.2/Jaspar
Match Rank: | 3 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ACCACTTTTC ACCACTTAA- |
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PB0136.1_IRC900814_2/Jaspar
Match Rank: | 4 |
Score: | 0.66 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----ACCACTTTTC-- TTTTACGACTTTCCAT |
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PH0004.1_Nkx3-2/Jaspar
Match Rank: | 5 |
Score: | 0.66 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----ACCACTTTTC--- CATAACCACTTAACAAC |
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PB0048.1_Nkx3-1_1/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----ACCACTTTTC--- CTTAACCACTTAAGGAT |
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 7 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -ACCACTTTTC MRSCACTYAA- |
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PH0115.1_Nkx2-6/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ACCACTTTTC--- TAAGCCACTTAACATT |
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PB0196.1_Zbtb7b_2/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------ACCACTTTTC- CATAAGACCACCATTAC |
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Hes2/MA0616.1/Jaspar
Match Rank: | 10 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ACCACTTTTC---- -GCACGTGTCNNNN |
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