Information for 11-TGGCCTGACC (Motif 16)

A C G T A C T G A C T G A G T C G T A C A C G T A C T G C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C C G T A A C T G A C T G A G T C A G T C C G T A
p-value:1e-6
log p-value:-1.444e+01
Information Content per bp:1.960
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets35.0 +/- 31.7bp
Average Position of motif in Background61.4 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCTGACC-
GTGGCGTGACNG
 A C G T A C G T A C T G A C T G A G T C G T A C A C G T A C T G C G T A A G T C A G T C A C G T
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCTGACC
ATGGGGTGAT-
 A C G T A C G T A C T G A C T G A G T C G T A C A C G T A C T G C G T A A G T C A G T C
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TGGCCTGACC
ATGGGGTGAT-
 A C G T A C G T A C T G A C T G A G T C G T A C A C G T A C T G C G T A A G T C A G T C
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:TGGCCTGACC-
-----TGACCT
 A C G T A C T G A C T G A G T C G T A C A C G T A C T G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:TGGCCTGACC---
-----TGACCYCT
 A C G T A C T G A C T G A G T C G T A C A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

SREBF1/MA0595.1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCTGACC
GTGGGGTGAT-
 A C G T A C G T A C T G A C T G A G T C G T A C A C G T A C T G C G T A A G T C A G T C
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TGGCCTGACC---
-----TGACCTYA
 A C G T A C T G A C T G A G T C G T A C A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGGCCTGACC-------
TGTCGTGACCCCTTAAT
 A C G T A C T G A C T G A G T C G T A C A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:TGGCCTGACC-----
-----TGACCTTGAT
 A C G T A C T G A C T G A G T C G T A C A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGGCCTGACC-------
-NNNNTGACCCGGCGCG
 A C G T A C T G A C T G A G T C G T A C A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G