Information for 9-GCCCTCTGCTGGA (Motif 14)

A C T G A T G C A G T C G T A C A C G T A G T C C G A T A C T G A T G C C G A T A C T G A T C G C G T A
Reverse Opposite:
A C G T A T G C G T A C C G T A A T C G A G T C C G T A C T A G C G T A A C T G A C T G T A C G A G T C
p-value:1e-7
log p-value:-1.808e+01
Information Content per bp:1.838
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif16.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets53.3 +/- 26.8bp
Average Position of motif in Background47.2 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.74
Offset:-7
Orientation:forward strand
Alignment:-------GCCCTCTGCTGGA
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G T C G T A C A C G T A G T C C G A T A C T G A T G C C G A T A C T G A T C G C G T A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----GCCCTCTGCTGGA--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C T G A T G C A G T C G T A C A C G T A G T C C G A T A C T G A T G C C G A T A C T G A T C G C G T A A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----GCCCTCTGCTGGA--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G T C G T A C A C G T A G T C C G A T A C T G A T G C C G A T A C T G A T C G C G T A A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCCCTCTGCTGGA
GCCATCTGTT---
 A C T G A T G C A G T C G T A C A C G T A G T C C G A T A C T G A T G C C G A T A C T G A T C G C G T A
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCCCTCTGCTGGA
ACCATCTGTT---
 A C T G A T G C A G T C G T A C A C G T A G T C C G A T A C T G A T G C C G A T A C T G A T C G C G T A
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCCCTCTGCTGGA
--DCTCAGCAGG-
 A C T G A T G C A G T C G T A C A C G T A G T C C G A T A C T G A T G C C G A T A C T G A T C G C G T A
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCCCTCTGCTGGA
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A C G T A C T G A T G C A G T C G T A C A C G T A G T C C G A T A C T G A T G C C G A T A C T G A T C G C G T A
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCCTCTGCTGGA
RCCATMTGTT---
 A C T G A T G C A G T C G T A C A C G T A G T C C G A T A C T G A T G C C G A T A C T G A T C G C G T A
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCCCTCTGCTGGA----
--DCHCAGCAGGRGGCC
 A C T G A T G C A G T C G T A C A C G T A G T C C G A T A C T G A T G C C G A T A C T G A T C G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCCCTCTGCTGGA--
---CACAGCAGGGGG
 A C T G A T G C A G T C G T A C A C G T A G T C C G A T A C T G A T G C C G A T A C T G A T C G C G T A A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G