Information for 8-YTTTTATTTTGGC (Motif 12)

A G T C A C G T A C G T A C G T A G C T T C G A A G C T A C G T C G A T A C G T A C T G C T A G A G T C
Reverse Opposite:
A C T G A G T C G T A C G T C A C G T A C G T A C T G A A C G T C T G A G T C A C G T A C G T A C T A G
p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.813
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif53.7
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets58.0 +/- 22.8bp
Average Position of motif in Background48.0 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--YTTTTATTTTGGC-
NNTGTTTATTTTGGCA
 A C G T A C G T A G T C A C G T A C G T A C G T A G C T T C G A A G C T A C G T C G A T A C G T A C T G C T A G A G T C A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

PB0186.1_Tcf3_2/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:YTTTTATTTTGGC--
NNTTTNTTTTNGNNN
 A G T C A C G T A C G T A C G T A G C T T C G A A G C T A C G T C G A T A C G T A C T G C T A G A G T C A C G T A C G T
C G T A C G A T A G C T C G A T A C G T C G A T C G A T C G A T A G C T G C A T T A G C A T C G T A C G A T G C G A C T

PB0123.1_Foxl1_2/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-YTTTTATTTTGGC--
NNTTTTGTTTTGATNT
 A C G T A G T C A C G T A C G T A C G T A G C T T C G A A G C T A C G T C G A T A C G T A C T G C T A G A G T C A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----YTTTTATTTTGGC
NNNNTTTTTTTTTNAAC
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A G C T T C G A A G C T A C G T C G A T A C G T A C T G C T A G A G T C
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PB0116.1_Elf3_2/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----YTTTTATTTTGGC
GNATTTTTTTTTTGANC
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A G C T T C G A A G C T A C G T C G A T A C G T A C T G C T A G A G T C
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-YTTTTATTTTGGC---
NNCTTTGTTTTGNTNNN
 A C G T A G T C A C G T A C G T A C G T A G C T T C G A A G C T A C G T C G A T A C G T A C T G C T A G A G T C A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:YTTTTATTTTGGC
TTTTTATTGG---
 A G T C A C G T A C G T A C G T A G C T T C G A A G C T A C G T C G A T A C G T A C T G C T A G A G T C
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:YTTTTATTTTGGC
NTTTTATTGG---
 A G T C A C G T A C G T A C G T A G C T T C G A A G C T A C G T C G A T A C G T A C T G C T A G A G T C
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:YTTTTATTTTGGC---
-TTCTATTTTTAGNNN
 A G T C A C G T A C G T A C G T A G C T T C G A A G C T A C G T C G A T A C G T A C T G C T A G A G T C A C G T A C G T A C G T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:YTTTTATTTTGGC
-TTTTATTRGN--
 A G T C A C G T A C G T A C G T A G C T T C G A A G C T A C G T C G A T A C G T A C T G C T A G A G T C
A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T