Information for 1-GTTAATAGYAGGG (Motif 5)

A C T G A C G T A C G T C G T A C T G A C G A T C G T A A T C G A G C T C G T A A C T G C T A G A C T G
Reverse Opposite:
A G T C G A T C A G T C C G A T C T G A T A G C C G A T C G T A A G C T G A C T G T C A T C G A A G T C
p-value:1e-12
log p-value:-2.807e+01
Information Content per bp:1.727
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif46.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets54.3 +/- 19.1bp
Average Position of motif in Background46.4 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0109.1_Bbx_2/Jaspar

Match Rank:1
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GTTAATAGYAGGG
TGATTGTTAACAGTTGG-
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A C T G A C G A T C G T A A T C G A G C T C G T A A C T G C T A G A C T G
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GTTAATAGYAGGG
NNNTTTNTAATACNG
 A C G T A C G T A C T G A C G T A C G T C G T A C T G A C G A T C G T A A T C G A G C T C G T A A C T G C T A G A C T G
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:3
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GTTAATAGYAGGG
NTGTTTAYATWW---
 A C G T A C G T A C T G A C G T A C G T C G T A C T G A C G A T C G T A A T C G A G C T C G T A A C T G C T A G A C T G
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A A C G T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GTTAATAGYAGGG
GGGAATTGTAGT-
 A C T G A C G T A C G T C G T A C T G A C G A T C G T A A T C G A G C T C G T A A C T G C T A G A C T G
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:5
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GTTAATAGYAGGG
CBTGTTTAYAWW----
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A C T G A C G A T C G T A A T C G A G C T C G T A A C T G C T A G A C T G
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T A C G T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GTTAATAGYAGGG
GCTAAAAATAGC-
 A C T G A C G T A C G T C G T A C T G A C G A T C G T A A T C G A G C T C G T A A C T G C T A G A C T G
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:7
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----GTTAATAGYAGGG
TATTGTTTATT------
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A C T G A C G A T C G T A A T C G A G C T C G T A A C T G C T A G A C T G
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:8
Score:0.48
Offset:7
Orientation:forward strand
Alignment:GTTAATAGYAGGG----
-------GGAGGGGGAA
 A C T G A C G T A C G T C G T A C T G A C G A T C G T A A T C G A G C T C G T A A C T G C T A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GTTAATAGYAGGG
TGTGGATTNNN---
 A C G T A C T G A C G T A C G T C G T A C T G A C G A T C G T A A T C G A G C T C G T A A C T G C T A G A C T G
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:10
Score:0.47
Offset:-3
Orientation:forward strand
Alignment:---GTTAATAGYAGGG
TATGTAAATAT-----
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A C T G A C G A T C G T A A T C G A G C T C G T A A C T G C T A G A C T G
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T