Information for 7-GAAAGGTCCACAG (Motif 21)

A C T G T C G A G T C A C G T A C T A G A C T G A C G T G T A C G A T C C G T A A G T C C G T A T A C G
Reverse Opposite:
A T G C C G A T A C T G G C A T C T A G A C T G G T C A G T A C A G T C G A C T A C G T A G C T T G A C
p-value:1e-7
log p-value:-1.813e+01
Information Content per bp:1.689
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif159.6
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets48.4 +/- 26.1bp
Average Position of motif in Background54.2 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GAAAGGTCCACAG
GGAGAAAGGTGCGA--
 A C G T A C G T A C G T A C T G T C G A G T C A C G T A C T A G A C T G A C G T G T A C G A T C C G T A A G T C C G T A T A C G
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GAAAGGTCCACAG
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C T G T C G A G T C A C G T A C T A G A C T G A C G T G T A C G A T C C G T A A G T C C G T A T A C G
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GAAAGGTCCACAG
ANGNAAAGGTCA----
 A C G T A C G T A C G T A C T G T C G A G T C A C G T A C T A G A C T G A C G T G T A C G A T C C G T A A G T C C G T A T A C G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GAAAGGTCCACAG
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C T G T C G A G T C A C G T A C T A G A C T G A C G T G T A C G A T C C G T A A G T C C G T A T A C G
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAAAGGTCCACAG-
GGCAAAAGTCCAATAA
 A C G T A C G T A C T G T C G A G T C A C G T A C T A G A C T G A C G T G T A C G A T C C G T A A G T C C G T A T A C G A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

NR2F1/MA0017.2/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAAAGGTCCACAG
CAAAGGTCAAGGG
 A C T G T C G A G T C A C G T A C T A G A C T G A C G T G T A C G A T C C G T A A G T C C G T A T A C G
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

Rarb/MA0857.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAAAGGTCCACAG----
-AAAGGTCAAAAGGTCA
 A C T G T C G A G T C A C G T A C T A G A C T G A C G T G T A C G A T C C G T A A G T C C G T A T A C G A C G T A C G T A C G T A C G T
A C G T G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAAAGGTCCACAG
TCAAGGTCAT---
 A C T G T C G A G T C A C G T A C T A G A C T G A C G T G T A C G A T C C G T A A G T C C G T A T A C G
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAAAGGTCCACAG
TCAAGGTCAN---
 A C T G T C G A G T C A C G T A C T A G A C T G A C G T G T A C G A T C C G T A A G T C C G T A T A C G
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------GAAAGGTCCACAG
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C G A G T C A C G T A C T A G A C T G A C G T G T A C G A T C C G T A A G T C C G T A T A C G
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A