Information for 5-CACAGCGTCA (Motif 20)

A G T C C G T A A T G C C T G A C T A G A G T C C T A G A G C T A T G C C G T A
Reverse Opposite:
A C G T A T C G C T G A G A T C C T A G A G T C A G C T A T C G A C G T A C T G
p-value:1e-8
log p-value:-1.843e+01
Information Content per bp:1.857
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif65.8
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets47.1 +/- 22.0bp
Average Position of motif in Background60.6 +/- 38.1bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CACAGCGTCA
CACAGN----
 A G T C C G T A A T G C C T G A C T A G A G T C C T A G A G C T A T G C C G T A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:2
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CACAGCGTCA
----ACGTCA
 A G T C C G T A A T G C C T G A C T A G A G T C C T A G A G C T A T G C C G T A
A C G T A C G T A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CACAGCGTCA--
GAGCACAGCAGGACA
 A C G T A C G T A C G T A G T C C G T A A T G C C T G A C T A G A G T C C T A G A G C T A T G C C G T A A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Atf1/MA0604.1/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CACAGCGTCA-
---TACGTCAT
 A G T C C G T A A T G C C T G A C T A G A G T C C T A G A G C T A T G C C G T A A C G T
A C G T A C G T A C G T A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T

Atf3/MA0605.1/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CACAGCGTCA--
----ACGTCATC
 A G T C C G T A A T G C C T G A C T A G A G T C C T A G A G C T A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C

PH0158.1_Rhox11_2/Jaspar

Match Rank:6
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------CACAGCGTCA-
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C C T G A C T A G A G T C C T A G A G C T A T G C C G T A A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:7
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CACAGCGTCA
GTAGGTCACTGGGTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C C T G A C T A G A G T C C T A G A G C T A T G C C G T A
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CACAGCGTCA
AAACCACAGC----
 A C G T A C G T A C G T A C G T A G T C C G T A A T G C C T G A C T A G A G T C C T A G A G C T A T G C C G T A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------CACAGCGTCA-
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C C T G A C T A G A G T C C T A G A G C T A T G C C G T A A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------CACAGCGTCA-
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C C T G A C T A G A G T C C T A G A G C T A T G C C G T A A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T