Information for 9-CMCCTWAYTCTVAGGY (Motif 16)

T G A C G T A C A T G C G A T C A G C T C G A T G T C A G A T C A C G T T A G C C G A T T A C G C G T A A C T G A C T G A G T C
Reverse Opposite:
C T A G G T A C G T A C C G A T A T G C G C T A A T C G G T C A C T A G C A G T C G T A C T G A C T A G A T C G C A T G A C T G
p-value:1e-8
log p-value:-2.023e+01
Information Content per bp:1.578
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif90.2
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets48.4 +/- 24.2bp
Average Position of motif in Background51.0 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CMCCTWAYTCTVAGGY
NNGCACCTTTCTCC-----
 A C G T A C G T A C G T T G A C G T A C A T G C G A T C A G C T C G A T G T C A G A T C A C G T T A G C C G A T T A C G C G T A A C T G A C T G A G T C
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CMCCTWAYTCTVAGGY
ANTCCTTTGTCTNNNN-
 A C G T T G A C G T A C A T G C G A T C A G C T C G A T G T C A G A T C A C G T T A G C C G A T T A C G C G T A A C T G A C T G A G T C
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CMCCTWAYTCTVAGGY
-CACTTCCTCT-----
 T G A C G T A C A T G C G A T C A G C T C G A T G T C A G A T C A C G T T A G C C G A T T A C G C G T A A C T G A C T G A G T C
A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T A C G T A C G T A C G T A C G T

T/MA0009.2/Jaspar

Match Rank:4
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CMCCTWAYTCTVAGGY
TCACACCTAGGTGTGA---
 A C G T A C G T A C G T T G A C G T A C A T G C G A T C A G C T C G A T G T C A G A T C A C G T T A G C C G A T T A C G C G T A A C T G A C T G A G T C
G A C T T G A C C T G A A G T C C T G A G A T C T G A C G C A T C T G A A C T G C T A G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:5
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--CMCCTWAYTCTVAGGY
GCAACCTCATTATNNNN-
 A C G T A C G T T G A C G T A C A T G C G A T C A G C T C G A T G T C A G A T C A C G T T A G C C G A T T A C G C G T A A C T G A C T G A G T C
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:6
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CMCCTWAYTCTVAGGY
-CACTTCCTGT-----
 T G A C G T A C A T G C G A T C A G C T C G A T G T C A G A T C A C G T T A G C C G A T T A C G C G T A A C T G A C T G A G T C
A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.47
Offset:2
Orientation:reverse strand
Alignment:CMCCTWAYTCTVAGGY
--ACTTCCTGTT----
 T G A C G T A C A T G C G A T C A G C T C G A T G T C A G A T C A C G T T A G C C G A T T A C G C G T A A C T G A C T G A G T C
A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:8
Score:0.47
Offset:-3
Orientation:reverse strand
Alignment:---CMCCTWAYTCTVAGGY
TTCCCCCTAC---------
 A C G T A C G T A C G T T G A C G T A C A T G C G A T C A G C T C G A T G T C A G A T C A C G T T A G C C G A T T A C G C G T A A C T G A C T G A G T C
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:9
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-CMCCTWAYTCTVAGGY
TGACCTARTT-------
 A C G T T G A C G T A C A T G C G A T C A G C T C G A T G T C A G A T C A C G T T A G C C G A T T A C G C G T A A C T G A C T G A G T C
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:CMCCTWAYTCTVAGGY
----TGAGTGACAGSC
 T G A C G T A C A T G C G A T C A G C T C G A T G T C A G A T C A C G T T A G C C G A T T A C G C G T A A C T G A C T G A G T C
A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C