Information for 8-GACCCDGACCTGAVBT (Motif 15)

C T A G G C T A G T A C A G T C A G T C C A G T A C T G C G T A A T G C A G T C A C G T A C T G C G T A T G A C A G C T C G A T
Reverse Opposite:
C G T A T C G A A C T G A C G T G T A C G T C A C T A G A T C G C G A T G T A C G C T A A C T G A C T G A C T G C A G T A G T C
p-value:1e-9
log p-value:-2.092e+01
Information Content per bp:1.761
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.4 +/- 22.7bp
Average Position of motif in Background45.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARA(var.2)/MA0730.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GACCCDGACCTGAVBT
TGACCTTTGCATGACCT
 A C G T C T A G G C T A G T A C A G T C A G T C C A G T A C T G C G T A A T G C A G T C A C G T A C T G C G T A T G A C A G C T C G A T
G A C T T A C G T G C A T G A C G T A C A G C T A G C T G C A T T C A G T A G C C T G A A C G T C T A G T G C A T G A C G T A C A G C T

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACCCDGACCTGAVBT
TGACCTTTANTTGACCT
 A C G T C T A G G C T A G T A C A G T C A G T C C A G T A C T G C G T A A T G C A G T C A C G T A C T G C G T A T G A C A G C T C G A T
G A C T C T A G T G C A T G A C A G T C G A C T A G C T G C A T T C G A A C T G C A G T A G C T A T C G C T G A G T A C A T G C A G C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GACCCDGACCTGAVBT
NNNNTGACCCGGCGCG-----
 A C G T A C G T A C G T A C G T A C G T C T A G G C T A G T A C A G T C A G T C C A G T A C T G C G T A A T G C A G T C A C G T A C T G C G T A T G A C A G C T C G A T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GACCCDGACCTGAVBT
BTGACCTCTNNHTGACCY
 A C G T A C G T C T A G G C T A G T A C A G T C A G T C C A G T A C T G C G T A A T G C A G T C A C G T A C T G C G T A T G A C A G C T C G A T
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GACCCDGACCTGAVBT
TGACCTTGACCT-----
 A C G T C T A G G C T A G T A C A G T C A G T C C A G T A C T G C G T A A T G C A G T C A C G T A C T G C G T A T G A C A G C T C G A T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GACCCDGACCTGAVBT
NNCNTGACCCCGCTCT-----
 A C G T A C G T A C G T A C G T A C G T C T A G G C T A G T A C A G T C A G T C C A G T A C T G C G T A A T G C A G T C A C G T A C T G C G T A T G A C A G C T C G A T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T A C G T A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GACCCDGACCTGAVBT
AAGACCCYYN--------
 A C G T A C G T C T A G G C T A G T A C A G T C A G T C C A G T A C T G C G T A A T G C A G T C A C G T A C T G C G T A T G A C A G C T C G A T
T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GACCCDGACCTGAVBT
TGACCTTGACCT-----
 A C G T C T A G G C T A G T A C A G T C A G T C C A G T A C T G C G T A A T G C A G T C A C G T A C T G C G T A T G A C A G C T C G A T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GACCCDGACCTGAVBT
---CCTCACCTG----
 C T A G G C T A G T A C A G T C A G T C C A G T A C T G C G T A A T G C A G T C A C G T A C T G C G T A T G A C A G C T C G A T
A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GACCCDGACCTGAVBT
TGACCT-----------
 A C G T C T A G G C T A G T A C A G T C A G T C C A G T A C T G C G T A A T G C A G T C A C G T A C T G C G T A T G A C A G C T C G A T
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T