Information for 5-AAACCACAVR (Motif 6)

G T C A C T G A T G C A A G T C A G T C T C G A G T A C C G T A T C A G T C A G
Reverse Opposite:
A G T C A G T C A C G T A C T G A G C T C T A G C T A G A C G T A G C T A C G T
p-value:1e-12
log p-value:-2.979e+01
Information Content per bp:1.665
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif4.62%
Number of Background Sequences with motif278.4
Percentage of Background Sequences with motif1.08%
Average Position of motif in Targets46.8 +/- 29.1bp
Average Position of motif in Background52.7 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.93
Offset:0
Orientation:forward strand
Alignment:AAACCACAVR
AAACCACANN
 G T C A C T G A T G C A A G T C A G T C T C G A G T A C C G T A T C A G T C A G
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-AAACCACAVR
NAAACCACAG-
 A C G T G T C A C T G A T G C A A G T C A G T C T C G A G T A C C G T A T C A G T C A G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:AAACCACAVR-
AAACCACAGAN
 G T C A C T G A T G C A A G T C A G T C T C G A G T A C C G T A T C A G T C A G A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:4
Score:0.90
Offset:0
Orientation:forward strand
Alignment:AAACCACAVR
AAACCGCAAA
 G T C A C T G A T G C A A G T C A G T C T C G A G T A C C G T A T C A G T C A G
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.89
Offset:0
Orientation:forward strand
Alignment:AAACCACAVR
AAACCGCAA-
 G T C A C T G A T G C A A G T C A G T C T C G A G T A C C G T A T C A G T C A G
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:AAACCACAVR
AAACCACAGC
 G T C A C T G A T G C A A G T C A G T C T C G A G T A C C G T A T C A G T C A G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-AAACCACAVR-
NWAACCACADNN
 A C G T G T C A C T G A T G C A A G T C A G T C T C G A G T A C C G T A T C A G T C A G A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AAACCACAVR
TCCAATCCACA--
 A C G T A C G T A C G T G T C A C T G A T G C A A G T C A G T C T C G A G T A C C G T A T C A G T C A G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AAACCACAVR
SSAATCCACANN
 A C G T A C G T G T C A C T G A T G C A A G T C A G T C T C G A G T A C C G T A T C A G T C A G
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

PB0034.1_Irf4_1/Jaspar

Match Rank:10
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------AAACCACAVR
CGTATCGAAACCAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A T G C A A G T C A G T C T C G A G T A C C G T A T C A G T C A G
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A A C G T A C G T