Information for 6-ACGGCAGAGGGMG (Motif 5)

C T G A G A T C T A C G A C T G T A G C C T G A A T C G C G T A C A T G A C T G C T A G G T C A A C T G
Reverse Opposite:
A G T C A C G T A G T C G T A C G A T C G C A T A T G C G A C T A T C G G T A C A T G C C T A G A G C T
p-value:1e-13
log p-value:-3.012e+01
Information Content per bp:1.729
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets60.6 +/- 17.5bp
Average Position of motif in Background51.7 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0150.1_Mybl1_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACGGCAGAGGGMG-
CACGGCAGTTGGTNN
 A C G T C T G A G A T C T A C G A C T G T A G C C T G A A T C G C G T A C A T G A C T G C T A G G T C A A C T G A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACGGCAGAGGGMG------
GCCASCAGGGGGCGCYVNNG
 A C G T C T G A G A T C T A C G A C T G T A G C C T G A A T C G C G T A C A T G A C T G C T A G G T C A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ACGGCAGAGGGMG-----
-NNNAAGGGGGCGGGNNN
 C T G A G A T C T A C G A C T G T A G C C T G A A T C G C G T A C A T G A C T G C T A G G T C A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACGGCAGAGGGMG
CACAGCGGGGGGTC
 A C G T C T G A G A T C T A C G A C T G T A G C C T G A A T C G C G T A C A T G A C T G C T A G G T C A A C T G
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:ACGGCAGAGGGMG----
-----RGKGGGCGKGGC
 C T G A G A T C T A C G A C T G T A G C C T G A A T C G C G T A C A T G A C T G C T A G G T C A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ACGGCAGAGGGMG
--AACAGATGGC-
 C T G A G A T C T A C G A C T G T A G C C T G A A T C G C G T A C A T G A C T G C T A G G T C A A C T G
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACGGCAGAGGGMG
NCGCAGCGGGGGGTC
 A C G T A C G T C T G A G A T C T A C G A C T G T A G C C T G A A T C G C G T A C A T G A C T G C T A G G T C A A C T G
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ACGGCAGAGGGMG
CACAGCAGGGGG--
 A C G T C T G A G A T C T A C G A C T G T A G C C T G A A T C G C G T A C A T G A C T G C T A G G T C A A C T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ACGGCAGAGGGMG----
--GGGNGGGGGCGGGGC
 C T G A G A T C T A C G A C T G T A G C C T G A A T C G C G T A C A T G A C T G C T A G G T C A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

INSM1/MA0155.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ACGGCAGAGGGMG
-TGTCAGGGGGCG
 C T G A G A T C T A C G A C T G T A G C C T G A A T C G C G T A C A T G A C T G C T A G G T C A A C T G
A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G