Information for 2-SCTKSCACTGGGY (Motif 5)

A T C G A G T C A C G T A C T G A T C G A G T C G T C A A G T C A C G T A C T G A C T G A C T G A G T C
Reverse Opposite:
C T A G A G T C A G T C A G T C C G T A A C T G A C G T A C T G A T G C G T A C C G T A A C T G A T G C
p-value:1e-13
log p-value:-3.181e+01
Information Content per bp:1.879
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.6 +/- 29.7bp
Average Position of motif in Background73.1 +/- 7.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:SCTKSCACTGGGY-
----WDNCTGGGCA
 A T C G A G T C A C G T A C T G A T C G A G T C G T C A A G T C A C G T A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:SCTKSCACTGGGY----
-CAATCACTGGCAGAAT
 A T C G A G T C A C G T A C T G A T C G A G T C G T C A A G T C A C G T A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:SCTKSCACTGGGY--
-NTGCCCTTGGGCGN
 A T C G A G T C A C G T A C T G A T C G A G T C G T C A A G T C A C G T A C T G A C T G A C T G A G T C A C G T A C G T
A C G T G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:SCTKSCACTGGGY--
---TCCCCTGGGGAC
 A T C G A G T C A C G T A C T G A T C G A G T C G T C A A G T C A C G T A C T G A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:SCTKSCACTGGGY
CTTGGCAA-----
 A T C G A G T C A C G T A C T G A T C G A G T C G T C A A G T C A C G T A C T G A C T G A C T G A G T C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:SCTKSCACTGGGY-
--TGCCCTNGGGCA
 A T C G A G T C A C G T A C T G A T C G A G T C G T C A A G T C A C G T A C T G A C T G A C T G A G T C A C G T
A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:SCTKSCACTGGGY-
--TGCCCTNGGGCA
 A T C G A G T C A C G T A C T G A T C G A G T C G T C A A G T C A C G T A C T G A C T G A C T G A G T C A C G T
A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-SCTKSCACTGGGY
VGCTGWCAVB----
 A C G T A T C G A G T C A C G T A C T G A T C G A G T C G T C A A G T C A C G T A C T G A C T G A C T G A G T C
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---SCTKSCACTGGGY----
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A C G T A T C G A G T C A C G T A C T G A T C G A G T C G T C A A G T C A C G T A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:SCTKSCACTGGGY-
--TGCCCNGGGGCA
 A T C G A G T C A C G T A C T G A T C G A G T C G T C A A G T C A C G T A C T G A C T G A C T G A G T C A C G T
A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A