Information for 3-CGCCCGCGGGYCGGGG (Motif 3)

A G T C C T A G A G T C A T G C A G T C T A C G A T G C A C T G A C T G A T C G A G C T A G T C A C T G A T C G T C A G A C T G
Reverse Opposite:
A G T C A G T C A T G C G T A C C T A G T C G A A T G C A G T C A G T C A T C G A T G C T A C G A T C G C T A G A G T C A C T G
p-value:1e-14
log p-value:-3.397e+01
Information Content per bp:1.784
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif9.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.5 +/- 21.4bp
Average Position of motif in Background52.8 +/- 46.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CGCCCGCGGGYCGGGG--
------GGGGGCGGGGCC
 A G T C C T A G A G T C A T G C A G T C T A C G A T G C A C T G A C T G A T C G A G C T A G T C A C T G A T C G T C A G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGCCCGCGGGYCGGGG
TGCCCNGGGGCA----
 A G T C C T A G A G T C A T G C A G T C T A C G A T G C A C T G A C T G A T C G A G C T A G T C A C T G A T C G T C A G A C T G
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:3
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CGCCCGCGGGYCGGGG-
-------GGGGNGGGGC
 A G T C C T A G A G T C A T G C A G T C T A C G A T G C A C T G A C T G A T C G A G C T A G T C A C T G A T C G T C A G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGCCCGCGGGYCGGGG
CCCCCCCGGGGGGGT-
 A G T C C T A G A G T C A T G C A G T C T A C G A T G C A C T G A C T G A T C G A G C T A G T C A C T G A T C G T C A G A C T G
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGCCCGCGGGYCGGGG
TGCCCTNGGGCA----
 A G T C C T A G A G T C A T G C A G T C T A C G A T G C A C T G A C T G A T C G A G C T A G T C A C T G A T C G T C A G A C T G
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CGCCCGCGGGYCGGGG-
------GGGGGCGGGGC
 A G T C C T A G A G T C A T G C A G T C T A C G A T G C A C T G A C T G A T C G A G C T A G T C A C T G A T C G T C A G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:8
Orientation:forward strand
Alignment:CGCCCGCGGGYCGGGG
--------GGGGGGGG
 A G T C C T A G A G T C A T G C A G T C T A C G A T G C A C T G A C T G A T C G A G C T A G T C A C T G A T C G T C A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGCCCGCGGGYCGGGG
CACCCCCGGGGGGG--
 A G T C C T A G A G T C A T G C A G T C T A C G A T G C A C T G A C T G A T C G A G C T A G T C A C T G A T C G T C A G A C T G
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGCCCGCGGGYCGGGG
ACCCCCCCGGGGGGN--
 A C G T A G T C C T A G A G T C A T G C A G T C T A C G A T G C A C T G A C T G A T C G A G C T A G T C A C T G A T C G T C A G A C T G
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CGCCCGCGGGYCGGGG---
----NNVDGGGYGGGGCYN
 A G T C C T A G A G T C A T G C A G T C T A C G A T G C A C T G A C T G A T C G A G C T A G T C A C T G A T C G T C A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A