Information for 22-CATTTAAATGTAG (Motif 49)

A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G
p-value:1e-3
log p-value:-7.636e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.7 +/- 14.0bp
Average Position of motif in Background64.4 +/- 35.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CATTTAAATGTAG
NATTCAAAT----
 A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T C G T A A C T G
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CATTTAAATGTAG---
NNTTTTACATGTANNNT
 A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

PH0084.1_Irx3_2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CATTTAAATGTAG---
NNTATTACATGTANNNT
 A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C G T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0082.1_Irx2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CATTTAAATGTAG---
ANTNTTACATGTATNTA
 A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

PH0087.1_Irx6/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CATTTAAATGTAG----
AAAATACATGTAAAAAT
 A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

PH0083.1_Irx3_1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CATTTAAATGTAG---
ANTATTACATGTANNNN
 A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CATTTAAATGTAG---
ANTNNTACATGTANNTN
 A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

PB0005.1_Bbx_1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CATTTAAATGTAG--
TAATTCAATGAAGTG
 A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T C G T A A C T G A C G T A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CATTTAAATGTAG
NGCAATTAAA-----
 A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T C G T A A C T G
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CATTTAAATGTAG
GCACTTAA------
 A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T C G T A A C T G
T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T