Information for 16-GTCCTAGTCA (Motif 48)

A C T G A C G T A G T C A G T C A C G T C G T A A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A G T C A C G T C G T A A C T G A C T G C G T A A G T C
p-value:1e-5
log p-value:-1.220e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.7 +/- 33.8bp
Average Position of motif in Background46.5 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------GTCCTAGTCA
GATAACATCCTAGTAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C T G A C G T A G T C C G T A
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GTCCTAGTCA--
--ACTAGTTAAC
 A C T G A C G T A G T C A G T C A C G T C G T A A C T G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTCCTAGTCA----
GAGCCCTTGTCCCTAA
 A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTCCTAGTCA
AGGCCTAG---
 A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C T G A C G T A G T C C G T A
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTCCTAGTCA-----
GAAAACTAGTTAACATC
 A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PB0108.1_Atf1_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTCCTAGTCA---
NTTATTCGTCATNC
 A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:7
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GTCCTAGTCA--
------GTCATN
 A C T G A C G T A G T C A G T C A C G T C G T A A C T G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTCCTAGTCA---
NNAGTCCCACTCNNNN
 A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GTCCTAGTCA---
-----AGTCACGC
 A C T G A C G T A G T C A G T C A C G T C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GTCCTAGTCA
BNTGDCCTTG---
 A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C T G A C G T A G T C C G T A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T