Information for 4-TCTGGCAGKRCAG (Motif 15)

C G A T A G T C A C G T A C T G A C T G G T A C C G T A A C T G A C G T C T A G G T A C C G T A A C T G
Reverse Opposite:
G T A C A C G T A C T G A G T C G T C A A G T C C G A T A C T G A G T C A G T C G T C A A C T G G C T A
p-value:1e-11
log p-value:-2.655e+01
Information Content per bp:1.848
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif21.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets48.2 +/- 20.0bp
Average Position of motif in Background47.2 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCTGGCAGKRCAG
GGTCTGGCAT-----
 A C G T A C G T C G A T A G T C A C G T A C T G A C T G G T A C C G T A A C T G A C G T C T A G G T A C C G T A A C T G
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCTGGCAGKRCAG
TNNGGGCAG-----
 A C G T C G A T A G T C A C G T A C T G A C T G G T A C C G T A A C T G A C G T C T A G G T A C C G T A A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCTGGCAGKRCAG
CTTGGCAA-----
 C G A T A G T C A C G T A C T G A C T G G T A C C G T A A C T G A C G T C T A G G T A C C G T A A C T G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCTGGCAGKRCAG
-TTGGCA------
 C G A T A G T C A C G T A C T G A C T G G T A C C G T A A C T G A C G T C T A G G T A C C G T A A C T G
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCTGGCAGKRCAG
-CCGGAAGTGGC-
 C G A T A G T C A C G T A C T G A C T G G T A C C G T A A C T G A C G T C T A G G T A C C G T A A C T G
A C G T T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C A C G T

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCTGGCAGKRCAG
NACCGGAAGT----
 A C G T C G A T A G T C A C G T A C T G A C T G G T A C C G T A A C T G A C G T C T A G G T A C C G T A A C T G
T C G A T C G A T A G C G T A C T C A G T A C G C G T A C G T A T C A G A G C T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCTGGCAGKRCAG
NTTGGCANN----
 C G A T A G T C A C G T A C T G A C T G G T A C C G T A A C T G A C G T C T A G G T A C C G T A A C T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T

ELK1/MA0028.2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TCTGGCAGKRCAG
ACCGGAAGTG---
 C G A T A G T C A C G T A C T G A C T G G T A C C G T A A C T G A C G T C T A G G T A C C G T A A C T G
C T G A T A G C T G A C A C T G A C T G T G C A G C T A T C A G A G C T C T A G A C G T A C G T A C G T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCTGGCAGKRCAG
AACCGGAAGT----
 A C G T C G A T A G T C A C G T A C T G A C T G G T A C C G T A A C T G A C G T C T A G G T A C C G T A A C T G
T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TCTGGCAGKRCAG
ACAGGAAGTG---
 C G A T A G T C A C G T A C T G A C T G G T A C C G T A A C T G A C G T C T A G G T A C C G T A A C T G
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T