Information for 2-CGTGTKGTTTTCC (Motif 11)

A T G C A C T G A C G T A C T G A C G T A C G T A C T G C G A T A C G T A G C T A C G T A G T C A G T C
Reverse Opposite:
A C T G T A C G C G T A C T G A G T C A C G T A A G T C G T A C C G T A A G T C C G T A A G T C A T C G
p-value:1e-11
log p-value:-2.739e+01
Information Content per bp:1.847
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.3 +/- 25.1bp
Average Position of motif in Background40.4 +/- 3.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGTGTKGTTTTCC
NNTGTGGTTT---
 A T G C A C T G A C G T A C T G A C G T A C G T A C T G C G A T A C G T A G C T A C G T A G T C A G T C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGTGTKGTTTTCC
NNHTGTGGTTWN--
 A C G T A T G C A C T G A C G T A C T G A C G T A C G T A C T G C G A T A C G T A G C T A C G T A G T C A G T C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGTGTKGTTTTCC
GCTGTGGTTT---
 A T G C A C T G A C G T A C T G A C G T A C G T A C T G C G A T A C G T A G C T A C G T A G T C A G T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGTGTKGTTTTCC
GTCTGTGGTTT---
 A C G T A T G C A C T G A C G T A C T G A C G T A C G T A C T G C G A T A C G T A G C T A C G T A G T C A G T C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGTGTKGTTTTCC
-CTGTGGTTTN--
 A T G C A C T G A C G T A C T G A C G T A C G T A C T G C G A T A C G T A G C T A C G T A G T C A G T C
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGTGTKGTTTTCC
--TGTGGATTNNN
 A T G C A C T G A C G T A C T G A C G T A C G T A C T G C G A T A C G T A G C T A C G T A G T C A G T C
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGTGTKGTTTTCC
NNTGTGGATTSS-
 A T G C A C T G A C G T A C T G A C G T A C G T A C T G C G A T A C G T A G C T A C G T A G T C A G T C
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CGTGTKGTTTTCC
---GGGGATTTCC
 A T G C A C T G A C G T A C T G A C G T A C G T A C T G C G A T A C G T A G C T A C G T A G T C A G T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

PB0141.1_Isgf3g_2/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGTGTKGTTTTCC
NNGTANTGTTTTNC
 A C G T A T G C A C T G A C G T A C T G A C G T A C G T A C T G C G A T A C G T A G C T A C G T A G T C A G T C
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.60
Offset:7
Orientation:forward strand
Alignment:CGTGTKGTTTTCC-
-------TTTTCCA
 A T G C A C T G A C G T A C T G A C G T A C G T A C T G C G A T A C G T A G C T A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A