Information for 5-AGGKACCYTKGGCWGR (Motif 6)

C G T A A C T G A C T G A C G T C G T A A G T C G T A C G A T C C A G T C A G T C T A G C A T G A T G C C G A T A C T G T C A G
Reverse Opposite:
A G T C A G T C C G T A A T C G G T A C G A T C G T C A G T C A C T A G A C T G A C T G C G A T T G C A T G A C A G T C C G A T
p-value:1e-13
log p-value:-3.025e+01
Information Content per bp:1.611
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.45%
Number of Background Sequences with motif251.7
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets49.7 +/- 23.6bp
Average Position of motif in Background48.5 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----AGGKACCYTKGGCWGR
GGTTAGAGACCT--------
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T C G T A A G T C G T A C G A T C C A G T C A G T C T A G C A T G A T G C C G A T A C T G T C A G
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:2
Score:0.47
Offset:1
Orientation:forward strand
Alignment:AGGKACCYTKGGCWGR
-GGCACCCAGGGGTGC
 C G T A A C T G A C T G A C G T C G T A A G T C G T A C G A T C C A G T C A G T C T A G C A T G A T G C C G A T A C T G T C A G
A C G T T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--AGGKACCYTKGGCWGR
CCAGGAACAG--------
 A C G T A C G T C G T A A C T G A C T G A C G T C G T A A G T C G T A C G A T C C A G T C A G T C T A G C A T G A T G C C G A T A C T G T C A G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX5/MA0014.2/Jaspar

Match Rank:4
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:AGGKACCYTKGGCWGR----
-GTCACGCTTGGCTGCNCNN
 C G T A A C T G A C T G A C G T C G T A A G T C G T A C G A T C C A G T C A G T C T A G C A T G A T G C C G A T A C T G T C A G A C G T A C G T A C G T A C G T
A C G T C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:5
Score:0.47
Offset:-2
Orientation:reverse strand
Alignment:--AGGKACCYTKGGCWGR
NRRGGGTCTT--------
 A C G T A C G T C G T A A C T G A C T G A C G T C G T A A G T C G T A C G A T C C A G T C A G T C T A G C A T G A T G C C G A T A C T G T C A G
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:AGGKACCYTKGGCWGR
NGTCACGCTTGGCTGC
 C G T A A C T G A C T G A C G T C G T A A G T C G T A C G A T C C A G T C A G T C T A G C A T G A T G C C G A T A C T G T C A G
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

POL002.1_INR/Jaspar

Match Rank:7
Score:0.45
Offset:8
Orientation:reverse strand
Alignment:AGGKACCYTKGGCWGR
--------NNNANTGA
 C G T A A C T G A C T G A C G T C G T A A G T C G T A C G A T C C A G T C A G T C T A G C A T G A T G C C G A T A C T G T C A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.45
Offset:2
Orientation:forward strand
Alignment:AGGKACCYTKGGCWGR-
--TGACANARRCCAGRC
 C G T A A C T G A C T G A C G T C G T A A G T C G T A C G A T C C A G T C A G T C T A G C A T G A T G C C G A T A C T G T C A G A C G T
A C G T A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.45
Offset:8
Orientation:forward strand
Alignment:AGGKACCYTKGGCWGR
--------TWGTCTGV
 C G T A A C T G A C T G A C G T C G T A A G T C G T A C G A T C C A G T C A G T C T A G C A T G A T G C C G A T A C T G T C A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

RARA(var.2)/MA0730.1/Jaspar

Match Rank:10
Score:0.45
Offset:2
Orientation:reverse strand
Alignment:AGGKACCYTKGGCWGR---
--TGACCTTTGCATGACCT
 C G T A A C T G A C T G A C G T C G T A A G T C G T A C G A T C C A G T C A G T C T A G C A T G A T G C C G A T A C T G T C A G A C G T A C G T A C G T
A C G T A C G T G A C T T A C G T G C A T G A C G T A C A G C T A G C T G C A T T C A G T A G C C T G A A C G T C T A G T G C A T G A C G T A C A G C T