Information for 22-GCATGCATGCGGTCAG (Motif 46)

A C T G A G T C C G T A A C G T A C T G A G T C C G T A A C G T A C T G A G T C A C T G A C T G A C G T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A A G T C A G T C A C T G A G T C C G T A A C G T A C T G A G T C C G T A A C G T A C T G A G T C
p-value:1e-3
log p-value:-9.061e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.27%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets71.0 +/- 5.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCATGCATGCGGTCAG
NTTNTATGAATGTGNNC--
 A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G A G T C C G T A A C G T A C T G A G T C A C T G A C T G A C G T A G T C C G T A A C T G
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:2
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCATGCATGCGGTCAG----
---NTNNNGGGGTCANGNNN
 A C T G A G T C C G T A A C G T A C T G A G T C C G T A A C G T A C T G A G T C A C T G A C T G A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:3
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GCATGCATGCGGTCAG
------TTGCGGTTT-
 A C T G A G T C C G T A A C G T A C T G A G T C C G T A A C G T A C T G A G T C A C T G A C T G A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.52
Offset:7
Orientation:forward strand
Alignment:GCATGCATGCGGTCAG
-------AGRGGTCA-
 A C T G A G T C C G T A A C G T A C T G A G T C C G T A A C G T A C T G A G T C A C T G A C T G A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.52
Offset:7
Orientation:forward strand
Alignment:GCATGCATGCGGTCAG
-------TRAGGTCA-
 A C T G A G T C C G T A A C G T A C T G A G T C C G T A A C G T A C T G A G T C A C T G A C T G A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

GCM1/MA0646.1/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GCATGCATGCGGTCAG
-----CATGCGGGTAC
 A C T G A G T C C G T A A C G T A C T G A G T C C G T A A C G T A C T G A G T C A C T G A C T G A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

GCM2/MA0767.1/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GCATGCATGCGGTCAG
-----TATGCGGGTA-
 A C T G A G T C C G T A A C G T A C T G A G T C C G T A A C G T A C T G A G T C A C T G A C T G A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCATGCATGCGGTCAG--
--NNNNATGCGGGTNNNN
 A C T G A G T C C G T A A C G T A C T G A G T C C G T A A C G T A C T G A G T C A C T G A C T G A C G T A G T C C G T A A C T G A C G T A C G T
A C G T A C G T G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:9
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:GCATGCATGCGGTCAG--
------ATGACGTCAYYN
 A C T G A G T C C G T A A C G T A C T G A G T C C G T A A C G T A C T G A G T C A C T G A C T G A C G T A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GCATGCATGCGGTCAG----
---GGCGAGGGGTCAAGGGC
 A C T G A G T C C G T A A C G T A C T G A G T C C G T A A C G T A C T G A G T C A C T G A C T G A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C