Information for 7-GTTAGGCTCC (Motif 42)

A C T G A C G T A C G T C G T A A C T G A C T G A G T C A C G T G T A C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C T G A G T C A G T C A C G T C G T A C G T A A G T C
p-value:1e-6
log p-value:-1.554e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.8 +/- 29.4bp
Average Position of motif in Background64.4 +/- 13.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GTTAGGCTCC-
-----GCTCCG
 A C T G A C G T A C G T C G T A A C T G A C T G A G T C A C G T G T A C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTTAGGCTCC-
GGTTAGAGACCT
 A C G T A C T G A C G T A C G T C G T A A C T G A C T G A G T C A C G T G T A C A G T C A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTTAGGCTCC---
-TTTGGCGCCAAA
 A C T G A C G T A C G T C G T A A C T G A C T G A G T C A C G T G T A C A G T C A C G T A C G T A C G T
A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GTTAGGCTCC
----NGCTN-
 A C T G A C G T A C G T C G T A A C T G A C T G A G T C A C G T G T A C A G T C
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTTAGGCTCC
--TWGTCTGV
 A C T G A C G T A C G T C G T A A C T G A C T G A G T C A C G T G T A C A G T C
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GTTAGGCTCC-
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G A G T C A C G T G T A C A G T C A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GTTAGGCTCC------
AGCTCGGCGCCAAAAGC
 A C G T A C T G A C G T A C G T C G T A A C T G A C T G A G T C A C G T G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GTTAGGCTCC-----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C T G A G T C A C G T G T A C A G T C A C G T A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GTTAGGCTCC------
----GGCTCYAKCAYC
 A C T G A C G T A C G T C G T A A C T G A C T G A G T C A C G T G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

PB0203.1_Zfp691_2/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GTTAGGCTCC------
TACGAGACTCCTCTAAC
 A C G T A C T G A C G T A C G T C G T A A C T G A C T G A G T C A C G T G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C