Information for 17-GCATGRCACCTAA (Motif 41)

C T A G T A G C G T C A C G A T A T C G C T G A A T G C G T C A G A T C A G T C A G C T G T C A T C G A
Reverse Opposite:
A C G T A C G T C T G A A C T G C A T G C A G T A T C G A G C T A T G C G C T A A C G T A C T G A G T C
p-value:1e-6
log p-value:-1.568e+01
Information Content per bp:1.699
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif68.2
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets41.0 +/- 25.2bp
Average Position of motif in Background50.9 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)3.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--GCATGRCACCTAA--
ATAAATGACACCTATCA
A C G T A C G T C T A G T A G C G T C A C G A T A T C G C T G A A T G C G T C A G A T C A G T C A G C T G T C A T C G A A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:GCATGRCACCTAA
---TGACACCT--
C T A G T A G C G T C A C G A T A T C G C T G A A T G C G T C A G A T C A G T C A G C T G T C A T C G A
A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GCATGRCACCTAA
---TCACACCT--
C T A G T A G C G T C A C G A T A T C G C T G A A T G C G T C A G A T C A G T C A G C T G T C A T C G A
A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCATGRCACCTAA
---TCACACCT--
C T A G T A G C G T C A C G A T A T C G C T G A A T G C G T C A G A T C A G T C A G C T G T C A T C G A
A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCATGRCACCTAA
---TCACACCT--
C T A G T A G C G T C A C G A T A T C G C T G A A T G C G T C A G A T C A G T C A G C T G T C A T C G A
A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCATGRCACCTAA
---TCACACCT--
C T A G T A G C G T C A C G A T A T C G C T G A A T G C G T C A G A T C A G T C A G C T G T C A T C G A
A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCATGRCACCTAA
-CTTCACACCTA-
C T A G T A G C G T C A C G A T A T C G C T G A A T G C G T C A G A T C A G T C A G C T G T C A T C G A
A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T

MGA/MA0801.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCATGRCACCTAA
---TCACACCT--
C T A G T A G C G T C A C G A T A T C G C T G A A T G C G T C A G A T C A G T C A G C T G T C A T C G A
A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCATGRCACCTAA
-KTTCACACCT--
C T A G T A G C G T C A C G A T A T C G C T G A A T G C G T C A G A T C A G T C A G C T G T C A T C G A
A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCATGRCACCTAA--
ACTATGCCAACCTACC
A C G T C T A G T A G C G T C A C G A T A T C G C T G A A T G C G T C A G A T C A G T C A G C T G T C A T C G A A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C