Information for 13-TGGTCWGTCCCBC (Motif 37)

A C G T A C T G A T C G A C G T A G T C C G A T A C T G A C G T A G T C A G T C A G T C A C G T A G T C
Reverse Opposite:
A C T G T C G A A C T G C T A G A C T G G T C A G T A C C G T A A C T G C G T A A T G C G T A C G T C A
p-value:1e-7
log p-value:-1.744e+01
Information Content per bp:1.814
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif19.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets37.6 +/- 29.5bp
Average Position of motif in Background37.1 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGGTCWGTCCCBC
-TGTCTGDCACCT
 A C G T A C T G A T C G A C G T A G T C C G A T A C T G A C G T A G T C A G T C A G T C A C G T A G T C
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TGGTCWGTCCCBC-
----NYTTCCCGCC
 A C G T A C T G A T C G A C G T A G T C C G A T A C T G A C G T A G T C A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGGTCWGTCCCBC--
----NCTTCCCGCCC
 A C G T A C T G A T C G A C G T A G T C C G A T A C T G A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGGTCWGTCCCBC
-GCTCGGSCTC--
 A C G T A C T G A T C G A C G T A G T C C G A T A C T G A C G T A G T C A G T C A G T C A C G T A G T C
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGGTCWGTCCCBC-
--GSCTGTCACTCA
 A C G T A C T G A T C G A C G T A G T C C G A T A C T G A C G T A G T C A G T C A G T C A C G T A G T C A C G T
A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGGTCWGTCCCBC
CTGTCTGTCACCT
 A C G T A C T G A T C G A C G T A G T C C G A T A C T G A C G T A G T C A G T C A G T C A C G T A G T C
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PB0114.1_Egr1_2/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TGGTCWGTCCCBC------
---NNAGTCCCACTCNNNN
 A C G T A C T G A T C G A C G T A G T C C G A T A C T G A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGGTCWGTCCCBC--
----NNTTCCCGCCC
 A C G T A C T G A T C G A C G T A G T C C G A T A C T G A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:9
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TGGTCWGTCCCBC----
-----TTTCCCGCCMAV
 A C G T A C T G A T C G A C G T A G T C C G A T A C T G A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TGGTCWGTCCCBC--
---NCTGTCAATCAN
 A C G T A C T G A T C G A C G T A G T C C G A T A C T G A C G T A G T C A G T C A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A