Information for 18-GTTAATNARAAGATAA (Motif 28)

A T C G C A G T A C G T T C G A C G T A A C G T A T G C C T G A C T A G G T C A C G T A T A C G G T C A G C A T G T C A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C G T A G T C A C G T A C G T A G T C A G C T A T C G G T C A A C G T A C G T C G T A G T C A A T G C
p-value:1e-9
log p-value:-2.100e+01
Information Content per bp:1.736
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.8 +/- 20.4bp
Average Position of motif in Background54.8 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxb5/MA0904.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTTAATNARAAGATAA
ACGGTAATTAGCTCAT--
 A C G T A C G T A T C G C A G T A C G T T C G A C G T A A C G T A T G C C T G A C T A G G T C A C G T A T A C G G T C A G C A T G T C A C G T A
T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T A C G T A C G T

PH0060.1_Hoxb5/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTTAATNARAAGATAA
ACGGTAATTAGCTCAT--
 A C G T A C G T A T C G C A G T A C G T T C G A C G T A A C G T A T G C C T G A C T A G G T C A C G T A T A C G G T C A G C A T G T C A C G T A
T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T A C G T A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GTTAATNARAAGATAA-
--AGATGKDGAGATAAG
 A T C G C A G T A C G T T C G A C G T A A C G T A T G C C T G A C T A G G T C A C G T A T A C G G T C A G C A T G T C A C G T A A C G T
A C G T A C G T C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

PB0001.1_Arid3a_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTTAATNARAAGATAA
GGGTTTAATTAAAATTC--
 A C G T A C G T A C G T A T C G C A G T A C G T T C G A C G T A A C G T A T G C C T G A C T A G G T C A C G T A T A C G G T C A G C A T G T C A C G T A
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GTTAATNARAAGATAA--
----AAGATAAGATAACA
 A T C G C A G T A C G T T C G A C G T A A C G T A T G C C T G A C T A G G T C A C G T A T A C G G T C A G C A T G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

PH0036.1_Gsx2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTTAATNARAAGATAA
AGGTTAATTAGCTGAT--
 A C G T A C G T A T C G C A G T A C G T T C G A C G T A A C G T A T G C C T G A C T A G G T C A C G T A T A C G G T C A G C A T G T C A C G T A
T C G A T A C G C T A G A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G G A T C A G C T A T C G C T G A C A G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:7
Score:0.60
Offset:10
Orientation:forward strand
Alignment:GTTAATNARAAGATAA--
----------AGATAAGA
 A T C G C A G T A C G T T C G A C G T A A C G T A T G C C T G A C T A G G T C A C G T A T A C G G T C A G C A T G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A

Gata4/MA0482.1/Jaspar

Match Rank:8
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:GTTAATNARAAGATAA--
-------NNGAGATAAGA
 A T C G C A G T A C G T T C G A C G T A A C G T A T G C C T G A C T A G G T C A C G T A T A C G G T C A G C A T G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

PH0081.1_Pdx1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTTAATNARAAGATAA
AAGGTAATTAGCTCAT--
 A C G T A C G T A T C G C A G T A C G T T C G A C G T A A C G T A T G C C T G A C T A G G T C A C G T A T A C G G T C A G C A T G T C A C G T A
T G C A T G C A C T A G A T C G G A C T T G C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T T A G C C G T A C A G T A C G T A C G T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTTAATNARAAGATAA
AGGTCACGGAGAGGTCA
 A C G T A T C G C A G T A C G T T C G A C G T A A C G T A T G C C T G A C T A G G T C A C G T A T A C G G T C A G C A T G T C A C G T A
C T G A A C T G C A T G A C G T A T G C C T G A A G C T T A C G T C A G C T G A T A C G T C G A A C T G A C T G C A G T A T G C C G T A