Information for 3-GMATCWRCTWGAC (Motif 9)

A C T G G T C A C G T A A C G T A G T C C G A T C T A G A G T C A C G T C G T A A T C G C G T A A G T C
Reverse Opposite:
A C T G A C G T A T G C C G A T C G T A A C T G A G T C C G T A A C T G C G T A A C G T A C G T A G T C
p-value:1e-11
log p-value:-2.573e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.8 +/- 32.8bp
Average Position of motif in Background36.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HSF4/MA0771.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GMATCWRCTWGAC
GAANNTTCTAGAA
 A C T G G T C A C G T A A C G T A G T C C G A T C T A G A G T C A C G T C G T A A T C G C G T A A G T C
T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

HSF2/MA0770.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GMATCWRCTWGAC
GAANGTTCTAGAA
 A C T G G T C A C G T A A C G T A G T C C G A T C T A G A G T C A C G T C G T A A T C G C G T A A G T C
T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GMATCWRCTWGAC
TAGAANVTTCTAGAA
 A C G T A C G T A C T G G T C A C G T A A C G T A G T C C G A T C T A G A G T C A C G T C G T A A T C G C G T A A G T C
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

PH0171.1_Nkx2-1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GMATCWRCTWGAC---
TAAGCCACTTGAAATT
 A C T G G T C A C G T A A C G T A G T C C G A T C T A G A G T C A C G T C G T A A T C G C G T A A G T C A C G T A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

HSF1/MA0486.2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GMATCWRCTWGAC
GAACGTTCTAGAA
 A C T G G T C A C G T A A C G T A G T C C G A T C T A G A G T C A C G T C G T A A T C G C G T A A G T C
C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

PH0113.1_Nkx2-4/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GMATCWRCTWGAC---
TAAGCCACTTGAAATT
 A C T G G T C A C G T A A C G T A G T C C G A T C T A G A G T C A C G T C G T A A T C G C G T A A G T C A C G T A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------GMATCWRCTWGAC
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A C G T A A C G T A G T C C G A T C T A G A G T C A C G T C G T A A T C G C G T A A G T C
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

Esrra/MA0592.2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GMATCWRCTWGAC
--ATGACCTTGAA
 A C T G G T C A C G T A A C G T A G T C C G A T C T A G A G T C A C G T C G T A A T C G C G T A A G T C
A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

SMAD3/MA0795.1/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GMATCWRCTWGAC-
----CGTCTAGACA
 A C T G G T C A C G T A A C G T A G T C C G A T C T A G A G T C A C G T C G T A A T C G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------GMATCWRCTWGAC
ADGGYAGYAGCATCT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A C G T A A C G T A G T C C G A T C T A G A G T C A C G T C G T A A T C G C G T A A G T C
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T A C G T A C G T