Information for 5-TGTAAGCYTAAAAAHA (Motif 5)

A C G T A C T G G A C T G C T A G C T A A C T G A G T C G A T C A G C T C T G A C G T A C G T A G C T A C G T A G T C A T C G A
Reverse Opposite:
A C G T C A G T C G A T C A G T C G A T G C A T A G C T C T G A C T A G C T A G T G A C C A G T C A G T C G T A G T A C G T C A
p-value:1e-12
log p-value:-2.809e+01
Information Content per bp:1.654
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif99.5
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets51.6 +/- 25.0bp
Average Position of motif in Background46.9 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2C/MA0497.1/Jaspar

Match Rank:1
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TGTAAGCYTAAAAAHA---
----ATGCTAAAAATAGAA
 A C G T A C T G G A C T G C T A G C T A A C T G A G T C G A T C A G C T C T G A C G T A C G T A G C T A C G T A G T C A T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TGTAAGCYTAAAAAHA--
----TACTGGAAAAAAAA
 A C G T A C T G G A C T G C T A G C T A A C T G A G T C G A T C A G C T C T G A C G T A C G T A G C T A C G T A G T C A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

HOXD12/MA0873.1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGTAAGCYTAAAAAHA
---AGTCGTAAAAA--
 A C G T A C T G G A C T G C T A G C T A A C T G A G T C G A T C A G C T C T G A C G T A C G T A G C T A C G T A G T C A T C G A
A C G T A C G T A C G T T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A A C G T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGTAAGCYTAAAAAHA
----GTCGTAAAAA--
 A C G T A C T G G A C T G C T A G C T A A C T G A G T C G A T C A G C T C T G A C G T A C G T A G C T A C G T A G T C A T C G A
A C G T A C G T A C G T A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T A C G T

FOXF2/MA0030.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGTAAGCYTAAAAAHA
--CAAACGTAAACAAT
 A C G T A C T G G A C T G C T A G C T A A C T G A G T C G A T C A G C T C T G A C G T A C G T A G C T A C G T A G T C A T C G A
A C G T A C G T A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

HOXC10/MA0905.1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TGTAAGCYTAAAAAHA
----GTCGTAAAAT--
 A C G T A C T G G A C T G C T A G C T A A C T G A G T C G A T C A G C T C T G A C G T A C G T A G C T A C G T A G T C A T C G A
A C G T A C G T A C G T A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGTAAGCYTAAAAAHA
---AAGCTTG------
 A C G T A C T G G A C T G C T A G C T A A C T G A G T C G A T C A G C T C T G A C G T A C G T A G C T A C G T A G T C A T C G A
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TGTAAGCYTAAAAAHA--
------TCTAAAAATAGA
 A C G T A C T G G A C T G C T A G C T A A C T G A G T C G A T C A G C T C T G A C G T A C G T A G C T A C G T A G T C A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TGTAAGCYTAAAAAHA--
------DCYAAAAATAGM
 A C G T A C T G G A C T G C T A G C T A A C T G A G T C G A T C A G C T C T G A C G T A C G T A G C T A C G T A G T C A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TGTAAGCYTAAAAAHA--
------GCTAAAAATAGC
 A C G T A C T G G A C T G C T A G C T A A C T G A G T C G A T C A G C T C T G A C G T A C G T A G C T A C G T A G T C A T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C