Information for 23-AGAGAAGMGGAAA (Motif 45)

T C G A C T A G C T G A A C T G C G T A T G C A T C A G T G A C C T A G C T A G T C G A T C G A C T G A
Reverse Opposite:
A G C T A G C T A G C T A G T C A G T C A C T G A G T C A C G T G C A T A G T C A G C T A G T C A C G T
p-value:1e-5
log p-value:-1.186e+01
Information Content per bp:1.692
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.57%
Number of Background Sequences with motif389.2
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets55.8 +/- 24.2bp
Average Position of motif in Background49.6 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AGAGAAGMGGAAA
-----AGAGGAA-
 T C G A C T A G C T G A A C T G C G T A T G C A T C A G T G A C C T A G C T A G T C G A T C G A C T G A
A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:2
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AGAGAAGMGGAAA--
-----AATGGAAAAT
 T C G A C T A G C T G A A C T G C G T A T G C A T C A G T G A C C T A G C T A G T C G A T C G A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AGAGAAGMGGAAA-
----AVCAGGAAGT
 T C G A C T A G C T G A A C T G C G T A T G C A T C A G T G A C C T A G C T A G T C G A T C G A C T G A A C G T
A C G T A C G T A C G T A C G T C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T

NFATC1/MA0624.1/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AGAGAAGMGGAAA--
-----NNTGGAAANN
 T C G A C T A G C T G A A C T G C G T A T G C A T C A G T G A C C T A G C T A G T C G A T C G A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

IRF1/MA0050.2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAAGMGGAAA------
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T T C G A C T A G C T G A A C T G C G T A T G C A T C A G T G A C C T A G C T A G T C G A T C G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGAGAAGMGGAAA----
--GGAAANTGAAACTNA
 T C G A C T A G C T G A A C T G C G T A T G C A T C A G T G A C C T A G C T A G T C G A T C G A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGAGAAGMGGAAA
-CGGAAGTGAAAC
 T C G A C T A G C T G A A C T G C G T A T G C A T C A G T G A C C T A G C T A G T C G A T C G A C T G A
A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGAGAAGMGGAAA
--NGAAGC-----
 T C G A C T A G C T G A A C T G C G T A T G C A T C A G T G A C C T A G C T A G T C G A T C G A C T G A
A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

ETV2/MA0762.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGAGAAGMGGAAA--
----AACCGGAAATA
 T C G A C T A G C T G A A C T G C G T A T G C A T C A G T G A C C T A G C T A G T C G A T C G A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C G A T A G C T G A C A C T G A C T G C G T A G C T A T C G A A G C T C T G A

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:10
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------AGAGAAGMGGAAA
NGTGTTCAVTSAAGCGKAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T G A A C T G C G T A T G C A T C A G T G A C C T A G C T A G T C G A T C G A C T G A
A G C T T A C G C G A T T C A G A G C T A C G T G A T C C T G A T A G C A G C T A T G C C T G A C G T A A T C G A G T C C T A G A C T G C T G A G T C A T C G A