Information for 18-CAGGTCTCCGCACGCC (Motif 39)

A G T C T C G A T A C G A C T G C A G T A T G C A G C T A G T C T A G C A T C G A G T C T G C A G A T C A C T G A T G C A G T C
Reverse Opposite:
A C T G T A C G T G A C C T A G A C G T T A C G A T G C A C T G C T A G T C G A A T C G G T C A T A G C A T G C A G C T C T A G
p-value:1e-6
log p-value:-1.610e+01
Information Content per bp:1.668
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.59%
Number of Background Sequences with motif542.1
Percentage of Background Sequences with motif1.11%
Average Position of motif in Targets48.8 +/- 24.3bp
Average Position of motif in Background50.6 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CAGGTCTCCGCACGCC
----GCTCCGCCCMCY
 A G T C T C G A T A C G A C T G C A G T A T G C A G C T A G T C T A G C A T C G A G T C T G C A G A T C A C T G A T G C A G T C
A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.59
Offset:8
Orientation:forward strand
Alignment:CAGGTCTCCGCACGCC
--------AGCGCGCC
 A G T C T C G A T A C G A C T G C A G T A T G C A G C T A G T C T A G C A T C G A G T C T G C A G A T C A C T G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CAGGTCTCCGCACGCC
---GGCCCCGCCCCC-
 A G T C T C G A T A C G A C T G C A G T A T G C A G C T A G T C T A G C A T C G A G T C T G C A G A T C A C T G A T G C A G T C
A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CAGGTCTCCGCACGCC-----
------NTCGCGCGCCTTNNN
 A G T C T C G A T A C G A C T G C A G T A T G C A G C T A G T C T A G C A T C G A G T C T G C A G A T C A C T G A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CAGGTCTCCGCACGCC-----
------ANCGCGCGCCCTTNN
 A G T C T C G A T A C G A C T G C A G T A T G C A G C T A G T C T A G C A T C G A G T C T G C A G A T C A C T G A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CAGGTCTCCGCACGCC
----GCCCCGCCCCC-
 A G T C T C G A T A C G A C T G C A G T A T G C A G C T A G T C T A G C A T C G A G T C T G C A G A T C A C T G A T G C A G T C
A C G T A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CAGGTCTCCGCACGCC
----DCTCAGCAGG--
 A G T C T C G A T A C G A C T G C A G T A T G C A G C T A G T C T A G C A T C G A G T C T G C A G A T C A C T G A T G C A G T C
A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CAGGTCTCCGCACGCC---
----GCCCCGCCCCCTCCC
 A G T C T C G A T A C G A C T G C A G T A T G C A G C T A G T C T A G C A T C G A G T C T G C A G A T C A C T G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CAGGTCTCCGCACGCC
----GCTCCG------
 A G T C T C G A T A C G A C T G C A G T A T G C A G C T A G T C T A G C A T C G A G T C T G C A G A T C A C T G A T G C A G T C
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

TP73/MA0861.1/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--CAGGTCTCCGCACGCC
GACATGTCTGGACATGTC
 A C G T A C G T A G T C T C G A T A C G A C T G C A G T A T G C A G C T A G T C T A G C A T C G A G T C T G C A G A T C A C T G A T G C A G T C
C A T G T C G A A G T C C T G A C G A T T A C G G A C T G A T C A G C T C T A G C T A G C T G A A G T C C G T A G A C T A T C G G A C T G T A C