Information for 2-CCGCKCTCMK (Motif 16)

A T G C G T A C T C A G G T A C A C G T A G T C A C G T A G T C G T C A A C T G
Reverse Opposite:
T G A C A C G T A C T G C G T A A C T G G T C A A C T G A G T C A C T G A T C G
p-value:1e-10
log p-value:-2.401e+01
Information Content per bp:1.759
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.36%
Number of Background Sequences with motif544.7
Percentage of Background Sequences with motif1.11%
Average Position of motif in Targets50.1 +/- 28.1bp
Average Position of motif in Background50.1 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CCGCKCTCMK
----GCTCCG
 A T G C G T A C T C A G G T A C A C G T A G T C A C G T A G T C G T C A A C T G
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCGCKCTCMK
AASCACTCAA
 A T G C G T A C T C A G G T A C A C G T A G T C A C G T A G T C G T C A A C T G
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCGCKCTCMK-
AGCCACTCAAG
 A T G C G T A C T C A G G T A C A C G T A G T C A C G T A G T C G T C A A C T G A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCGCKCTCMK--
TGGCGCGCGCGCCTGA
 A C G T A C G T A C G T A C G T A T G C G T A C T C A G G T A C A C G T A G T C A C G T A G T C G T C A A C T G A C G T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCGCKCTCMK----
ACCACTCTCGGTCAC
 A C G T A T G C G T A C T C A G G T A C A C G T A G T C A C G T A G T C G T C A A C T G A C G T A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

SP3/MA0746.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCGCKCTCMK
GCCACGCCCCC
 A C G T A T G C G T A C T C A G G T A C A C G T A G T C A C G T A G T C G T C A A C T G
T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCGCKCTCMK---
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A T G C G T A C T C A G G T A C A C G T A G T C A C G T A G T C G T C A A C T G A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PB0039.1_Klf7_1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCGCKCTCMK--
TCGACCCCGCCCCTAT
 A C G T A C G T A C G T A C G T A T G C G T A C T C A G G T A C A C G T A G T C A C G T A G T C G T C A A C T G A C G T A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCGCKCTCMK
GCCCCGCCCC-
 A C G T A T G C G T A C T C A G G T A C A C G T A G T C A C G T A G T C G T C A A C T G
A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCGCKCTCMK
GGCCACRCCCMK
 A C G T A C G T A T G C G T A C T C A G G T A C A C G T A G T C A C G T A G T C G T C A A C T G
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G