Information for 6-GGTGCCWGAGCGS (Motif 10)

A C T G T A C G C A G T A C T G A G T C A T G C C G T A A C T G T C G A A T C G A T G C C T A G A T G C
Reverse Opposite:
A T C G G A T C A T C G A T G C A G C T A G T C G C A T A T C G T C A G A G T C G T C A A T G C A G T C
p-value:1e-11
log p-value:-2.552e+01
Information Content per bp:1.701
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.8 +/- 21.2bp
Average Position of motif in Background61.9 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGTGCCWGAGCGS
-GAGSCCGAGC--
 A C T G T A C G C A G T A C T G A G T C A T G C C G T A A C T G T C G A A T C G A T G C C T A G A T G C
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGTGCCWGAGCGS
GRTGMTRGAGCC-
 A C T G T A C G C A G T A C T G A G T C A T G C C G T A A C T G T C G A A T C G A T G C C T A G A T G C
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGTGCCWGAGCGS
RGKGGGCGGAGC--
 A C G T A C T G T A C G C A G T A C T G A G T C A T G C C G T A A C T G T C G A A T C G A T G C C T A G A T G C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGTGCCWGAGCGS
GGGGGCGGGGCC-
 A C T G T A C G C A G T A C T G A G T C A T G C C G T A A C T G T C G A A T C G A T G C C T A G A T G C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGTGCCWGAGCGS
AGGTGNCAGACAG-
 A C G T A C T G T A C G C A G T A C T G A G T C A T G C C G T A A C T G T C G A A T C G A T G C C T A G A T G C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GGTGCCWGAGCGS
-----CGGAGC--
 A C T G T A C G C A G T A C T G A G T C A T G C C G T A A C T G T C G A A T C G A T G C C T A G A T G C
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGTGCCWGAGCGS
AGGTGHCAGACA--
 A C G T A C T G T A C G C A G T A C T G A G T C A T G C C G T A A C T G T C G A A T C G A T G C C T A G A T G C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGTGCCWGAGCGS-
--TGTCAGGGGGCG
 A C T G T A C G C A G T A C T G A G T C A T G C C G T A A C T G T C G A A T C G A T G C C T A G A T G C A C G T
A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

NR2C2/MA0504.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGTGCCWGAGCGS-
AGGGGTCAGAGGTCA
 A C G T A C T G T A C G C A G T A C T G A G T C A T G C C G T A A C T G T C G A A T C G A T G C C T A G A T G C A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGTGCCWGAGCGS
VBTGWCAGCB---
 A C T G T A C G C A G T A C T G A G T C A T G C C G T A A C T G T C G A A T C G A T G C C T A G A T G C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T