Information for 5-CATGTTTTAAGAAGTG (Motif 9)

G T A C C G T A C A G T C A T G A G C T A C G T A C G T A G C T C G T A T G C A T A C G G T C A C G T A A C T G C A G T A T C G
Reverse Opposite:
A T G C G C T A G T A C C G A T A C G T A T G C A C G T G A C T C T G A G T C A C G T A C T G A G A T C G C T A G C A T A C T G
p-value:1e-11
log p-value:-2.732e+01
Information Content per bp:1.683
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 25.1bp
Average Position of motif in Background50.9 +/- 45.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD11/MA0908.1/Jaspar

Match Rank:1
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CATGTTTTAAGAAGTG
---NTTTTACGAC---
 G T A C C G T A C A G T C A T G A G C T A C G T A C G T A G C T C G T A T G C A T A C G G T C A C G T A A C T G C A G T A T C G
A C G T A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T A C G T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CATGTTTTAAGAAGTG
---NTTTTACGACT--
 G T A C C G T A C A G T C A T G A G C T A C G T A C G T A G C T C G T A T G C A T A C G G T C A C G T A A C T G C A G T A T C G
A C G T A C G T A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T A C G T A C G T

PH0047.1_Hoxa11/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CATGTTTTAAGAAGTG-
-NNGTTTTACGACTTTA
 G T A C C G T A C A G T C A T G A G C T A C G T A C G T A G C T C G T A T G C A T A C G G T C A C G T A A C T G C A G T A T C G A C G T
A C G T G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

HOXC13/MA0907.1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CATGTTTTAAGAAGTG
---NTTTTACGAGN--
 G T A C C G T A C A G T C A T G A G C T A C G T A C G T A G C T C G T A T G C A T A C G G T C A C G T A A C T G C A G T A T C G
A C G T A C G T A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CATGTTTTAAGAAGTG
---NTTTTACGAC---
 G T A C C G T A C A G T C A T G A G C T A C G T A C G T A G C T C G T A T G C A T A C G G T C A C G T A A C T G C A G T A T C G
A C G T A C G T A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T A C G T

TP63/MA0525.2/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CATGTTTTAAGAAGTG
AACATGTTGGGACATGTC
 A C G T A C G T G T A C C G T A C A G T C A T G A G C T A C G T A C G T A G C T C G T A T G C A T A C G G T C A C G T A A C T G C A G T A T C G
C T G A C T G A A G T C C T G A G C A T A C T G G A C T G A C T T C A G A C T G C T A G C T G A A G T C C G T A G A C T A C T G G A C T G T A C

PH0077.1_Hoxd12/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CATGTTTTAAGAAGTG-
NNNATTTTACGACNNTN
 G T A C C G T A C A G T C A T G A G C T A C G T A C G T A G C T C G T A T G C A T A C G G T C A C G T A A C T G C A G T A T C G A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CATGTTTTAAGAAGTG
--DGWTTTATGRCN--
 G T A C C G T A C A G T C A T G A G C T A C G T A C G T A G C T C G T A T G C A T A C G G T C A C G T A A C T G C A G T A T C G
A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CATGTTTTAAGAAGTG-
-NAATTTTACGAGNTNN
 G T A C C G T A C A G T C A T G A G C T A C G T A C G T A G C T C G T A T G C A T A C G G T C A C G T A A C T G C A G T A T C G A C G T
A C G T G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

PH0066.1_Hoxc11/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CATGTTTTAAGAAGTG-
-NNNTTTTACGACNTTN
 G T A C C G T A C A G T C A T G A G C T A C G T A C G T A G C T C G T A T G C A T A C G G T C A C G T A A C T G C A G T A T C G A C G T
A C G T G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A