Information for 5-CCAAATAAAA (Motif 30)

G T A C G T A C C G T A C G T A C G T A C G A T C T G A T G C A C G T A C G T A
Reverse Opposite:
C G A T A C G T A C G T G A C T C G T A A C G T A C G T A C G T C A T G C A T G
p-value:1e-8
log p-value:-2.048e+01
Information Content per bp:1.851
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.21%
Number of Background Sequences with motif353.9
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets48.2 +/- 23.3bp
Average Position of motif in Background52.0 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0057.1_Hoxb13/Jaspar

Match Rank:1
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--CCAAATAAAA----
AACCCAATAAAATTCG
 A C G T A C G T G T A C G T A C C G T A C G T A C G T A C G A T C T G A T G C A C G T A C G T A A C G T A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:2
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:CCAAATAAAA
CCYMATAAAA
 G T A C G T A C C G T A C G T A C G T A C G A T C T G A T G C A C G T A C G T A
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

HOXB13/MA0901.1/Jaspar

Match Rank:3
Score:0.79
Offset:1
Orientation:forward strand
Alignment:CCAAATAAAA-
-CCAATAAAAC
 G T A C G T A C C G T A C G T A C G T A C G A T C T G A T G C A C G T A C G T A A C G T
A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.79
Offset:1
Orientation:forward strand
Alignment:CCAAATAAAA-
-CCAATAAAAA
 G T A C G T A C C G T A C G T A C G T A C G A T C T G A T G C A C G T A C G T A A C G T
A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

HOXA13/MA0650.1/Jaspar

Match Rank:5
Score:0.78
Offset:1
Orientation:forward strand
Alignment:CCAAATAAAA-
-CCAATAAAAA
 G T A C G T A C C G T A C G T A C G T A C G A T C T G A T G C A C G T A C G T A A C G T
A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CCAAATAAAA----
CTACCAATAAAATTCT
 A C G T A C G T G T A C G T A C C G T A C G T A C G T A C G A T C T G A T G C A C G T A C G T A A C G T A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CCAAATAAAA
NCYAATAAAA
 G T A C G T A C C G T A C G T A C G T A C G A T C T G A T G C A C G T A C G T A
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A

PB0093.1_Zfp105_1/Jaspar

Match Rank:8
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CCAAATAAAA----
AACAAACAACAAGAG
 A C G T G T A C G T A C C G T A C G T A C G T A C G A T C T G A T G C A C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0116.1_Elf3_2/Jaspar

Match Rank:9
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CCAAATAAAA----
GTTCAAAAAAAAAATTC
 A C G T A C G T A C G T G T A C G T A C C G T A C G T A C G T A C G A T C T G A T G C A C G T A C G T A A C G T A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PH0075.1_Hoxd10/Jaspar

Match Rank:10
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCAAATAAAA-----
AATGCAATAAAATTTAT
 A C G T A C G T G T A C G T A C C G T A C G T A C G T A C G A T C T G A T G C A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T