Information for 1-TCCCAGGAGAGAS (Motif 3)

A C G T A T G C G T A C A G T C C T G A A C T G C T A G C G T A C T A G C T G A A T C G C T G A T A G C
Reverse Opposite:
A T C G G A C T A T G C G A C T A G T C A C G T A G T C A G T C G A C T C T A G A C T G T A C G C G T A
p-value:1e-13
log p-value:-3.037e+01
Information Content per bp:1.713
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.98%
Number of Background Sequences with motif354.4
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets54.7 +/- 24.1bp
Average Position of motif in Background48.5 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT3/MA0144.2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TCCCAGGAGAGAS
TTTCCCAGAAN----
 A C G T A C G T A C G T A T G C G T A C A G T C C T G A A C T G C T A G C G T A C T A G C T G A A T C G C T G A T A G C
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TCCCAGGAGAGAS
TTTCCAGGAAA---
 A C G T A C G T A T G C G T A C A G T C C T G A A C T G C T A G C G T A C T A G C T G A A T C G C T G A T A G C
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TCCCAGGAGAGAS-
TTTCCTGGAAAGNNN
 A C G T A C G T A T G C G T A C A G T C C T G A A C T G C T A G C G T A C T A G C T G A A T C G C T G A T A G C A C G T
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

Stat4/MA0518.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TCCCAGGAGAGAS
TTTCCAGGAAATGG
 A C G T A C G T A T G C G T A C A G T C C T G A A C T G C T A G C G T A C T A G C T G A A T C G C T G A T A G C
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TCCCAGGAGAGAS
ATTTCCAAGAA-----
 A C G T A C G T A C G T A C G T A T G C G T A C A G T C C T G A A C T G C T A G C G T A C T A G C T G A A T C G C T G A T A G C
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T A C G T A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCCCAGGAGAGAS
TTTCCNGGAAAN--
 A C G T A C G T A T G C G T A C A G T C C T G A A C T G C T A G C G T A C T A G C T G A A T C G C T G A T A G C
A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCCCAGGAGAGAS
TTCCNGGAAG----
 A C G T A C G T A T G C G T A C A G T C C T G A A C T G C T A G C G T A C T A G C T G A A T C G C T G A T A G C
G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T A C G T A C G T A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TCCCAGGAGAGAS
KGTTGCTAGGMAACA-
 A C G T A C G T A C G T A C G T A T G C G T A C A G T C C T G A A C T G C T A G C G T A C T A G C T G A A T C G C T G A T A G C
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TCCCAGGAGAGAS
NNCTTCCNGGAAGN--
 A C G T A C G T A C G T A C G T A T G C G T A C A G T C C T G A A C T G C T A G C G T A C T A G C T G A A T C G C T G A T A G C
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TCCCAGGAGAGAS
ATTTCCCAGVAKSCY-
 A C G T A C G T A C G T A C G T A T G C G T A C A G T C C T G A A C T G C T A G C G T A C T A G C T G A A T C G C T G A T A G C
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T