Information for 15-CCWKGCMAGGTGAGAA (Motif 28)

A G T C G T A C C G T A A C G T A T C G A G T C G T A C T C G A A C T G A T C G C G A T C T A G C G T A A T C G C G T A C T G A
Reverse Opposite:
A G C T A C G T A T G C G C A T A G T C C G T A A T G C A G T C A G C T C A T G T A C G A T G C G T C A C G A T A C T G T A C G
p-value:1e-9
log p-value:-2.188e+01
Information Content per bp:1.726
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif58.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets59.5 +/- 22.0bp
Average Position of motif in Background47.4 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.69
Offset:7
Orientation:reverse strand
Alignment:CCWKGCMAGGTGAGAA-
-------AGGTGTTAAT
 A G T C G T A C C G T A A C G T A T C G A G T C G T A C T C G A A C T G A T C G C G A T C T A G C G T A A T C G C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

TBR1/MA0802.1/Jaspar

Match Rank:2
Score:0.69
Offset:7
Orientation:forward strand
Alignment:CCWKGCMAGGTGAGAA-
-------AGGTGTGAAA
 A G T C G T A C C G T A A C G T A T C G A G T C G T A C T C G A A C T G A T C G C G A T C T A G C G T A A T C G C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

TBX21/MA0690.1/Jaspar

Match Rank:3
Score:0.69
Offset:6
Orientation:forward strand
Alignment:CCWKGCMAGGTGAGAA
------AAGGTGTGAA
 A G T C G T A C C G T A A C G T A T C G A G T C G T A C T C G A A C T G A T C G C G A T C T A G C G T A A T C G C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CCWKGCMAGGTGAGAA----
---GAAAAGGTGTGAAAATT
 A G T C G T A C C G T A A C G T A T C G A G T C G T A C T C G A A C T G A T C G C G A T C T A G C G T A A T C G C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.68
Offset:6
Orientation:forward strand
Alignment:CCWKGCMAGGTGAGAA---
------AAGGTGTGAAAAT
 A G T C G T A C C G T A A C G T A T C G A G T C G T A C T C G A A C T G A T C G C G A T C T A G C G T A A T C G C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.67
Offset:7
Orientation:forward strand
Alignment:CCWKGCMAGGTGAGAA-
-------AGGTGTGAAM
 A G T C G T A C C G T A A C G T A T C G A G T C G T A C T C G A A C T G A T C G C G A T C T A G C G T A A T C G C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.67
Offset:6
Orientation:forward strand
Alignment:CCWKGCMAGGTGAGAA-
------AAGGTGTGAAA
 A G T C G T A C C G T A A C G T A T C G A G T C G T A C T C G A A C T G A T C G C G A T C T A G C G T A A T C G C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.66
Offset:6
Orientation:forward strand
Alignment:CCWKGCMAGGTGAGAA-
------TAGGTGTGAAG
 A G T C G T A C C G T A A C G T A T C G A G T C G T A C T C G A A C T G A T C G C G A T C T A G C G T A A T C G C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

TBX15/MA0803.1/Jaspar

Match Rank:9
Score:0.66
Offset:7
Orientation:forward strand
Alignment:CCWKGCMAGGTGAGAA
-------AGGTGTGA-
 A G T C G T A C C G T A A C G T A T C G A G T C G T A C T C G A A C T G A T C G C G A T C T A G C G T A A T C G C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:10
Score:0.65
Offset:6
Orientation:forward strand
Alignment:CCWKGCMAGGTGAGAA
------AAGGTGTKAA
 A G T C G T A C C G T A A C G T A T C G A G T C G T A C T C G A A C T G A T C G C G A T C T A G C G T A A T C G C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A